| Id Trinity | TRINITY_DN44435_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_478172 |
| Sequence | CATGAAGGCGTTATTCATCCCCATGTTGCGTAGCACCTTCCTTTCTTTCTTTCCCACCTCTCCTGTTTCTATCTGACCCCACACACTCTCTCTATATATA TATTTGAGAGCTCATAGTCATATACCTATACTTTCTCTCTCCTCGCTCTTTCTCACTGTTTTCCTGAAATTGTGGACACAGATTTTATCTCCGATAATCG CGGTGTACAAAAATGCACAATTTCACTTTCTTCCAACGAGTTTCTAAAGCTTTCCGTAATCATGACTCTCACATCAAGCTTCTTCTGCTATGCACCACCG TAACCGTAAGTGGTGGCGGACTTTTGGCATATGGTGATGCTGTTGCTGCATCTGAAGCAGCATTGGTGACAGAAAAGAAGAAGGTGGTGGTACTTGGAAC TGGCTGGGCTGGAACAAGTTTCTTGAAGAATCTAAACAACCCAAAATATGATGTTCACGTGGTGTCTCCTCGCAACTACTTTACATTCACTCCTTTGCTT CCAAGCGTTACTTGTGGCACAGTCGAGGCCCGCAGCATTGTTGAACCCATTCGCAATATATTTAGGAAGGTAATCATCAAAACAAGCAAGTTTCTACCAA TTCCTTACTGGGCCATCATGAATTTGTTAATCAGTTTTAGAAAAATATTCACTAATCATTAAATTTTGGGTTATATGTTTTCATTTCCATTATTAGCCCT GTCAATATAATTTTATATGCTTGATAAAAATTACTCAACAACTCTTTTTAAAATAAAAACTTAGTACCGATATAATGGAAGTTACCCTTAACTAAGGGGA GACAGTTTTGACTTCATTGTTGTACCACCACGATAATCCTTCAAGAAATAGTTTATTTCATTACCAAAAAAAGAGTTGGCTTATAACTCATTGGCGGGCC AGAGGAATAGTCTAAGCCATATCCAATCAAAAAGGTATGTTGTCTAAACACATATCAAGTAATTATAGCATCTTAATCACACTCATCACTTGTCAGATTG TACGTCGCCATAAACAGTAGGATATGTTGATGTGCTAACCATTACTGTTAAGAGGGTATATATTCTGGTAATTAGATTGTCAGCATAAAAGTTTAGTACA TATAACTAGACCCCTTTATTTGTTTTATATTGGCAGAAAAAGGGGGACATTCAATTCAGTGAAGCTGAATGTCTCAAGATTGACGCAGCGAACAGGAAAA TTTACTGTCGGACTAATATAAGCGATAACGAGAACGAATTTGTTGTGGACTATGACTACCTTATCATAGCTGTTGGAGCAAATGTCAACACATTCAATAC TCCTGGGGTGGTGGAGAATTGTCATTTTCTGAAGGAAGTTGAAGATGCGCAGAAGATTAGAAGAACAGTTATTGACTGCTTTGAGAGAGCAAGTTTGCCT GGTTTAAGTGAAGAAGAGAGGAAGAGGGTTCTTCATTTTGCTATTGTTGGAGGTGGTCCAACTGGAGTGGAGTTTGCAGCCTCACTTCATGACTTTGTTA CCGAGGATCTGGTCAAGTTATATCCTGGTATAAAAGATTTAGTTAAAATTACGCTTCTGGAGGCTGGAGATCATATTTTGAGCATGTTTGACAAAAGAAT CACTGCTTTTGCTGAAGACAAGTTCCGAAGAGATGGTATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTATCTGAGAAAGAAATTTCTACTAAATCA CTGAAAAATGGAGGAGAAATTGCTACAATTCCATATGGAATGGCTGTCTGGTCAACTGGCATTGGCACTCGTCCATTTGTTAAAGATTTCATGACACAAA TTGGCCAGATTAACAGGCGTGCAGTTGCTACTGATGAATGGTTGAGAGTTGAAGGAACCGACAATGTGTATGCGCTTGGTGATTGTGCTACGATAAACCA GAGGAAAGTCATGGTACCTAATACTATTTCTCCTTTCTTCATTTAATAAAACATTGAGCATTCTTAATTTCATAGTAGCGTGCATGTTCTTGCACATGTA TATGAGTGTGACACTCACGCTATTCCATTTTTATGGATAGACTTTATAGTCTCTTTATATTTGCAGTTTCTTTGTTGTCTTTCAATATAATAATACATTT ATCTTCTTCTGATGAAATAGTAAAATCTCCATCATTAGACACTTTCGGCAGAATGCACATATTTCTTAATAACTTTGTGTTCGCCAGTATTTTGCCTTGT TAAACTAGCTGAATGTATTATAAAGATACATCTATTGACGACTTGCAACATGTATGAAGCATGGCATTTATTTGTTTTTCAAATGCTATCTTTCTTCCTA TTAATTTGGAAATTGGGATTTGACATTATAGGAAGACATTTCTGCTATCTTTAAGAAGGCTGACACAGACAACTCAGGAAAACTTACAGTCAAAGAATTC CAAGCTGCATTGGAAGACATCTGTGAAAGATACCCACAGGTGGAGCTATATCTTAAGAGTAATCACATGCACAACATTGCTGATCTGTTGAAGGAATCCA AGGGAGATGTTCAAAAAGAATCTATTGAACTTAACATTGAAGAACTGAAAACCTTACTTTCTAAAGTGGATTCTCAGATGAAATTTCTTCCCGCAACCGC GCAGGTACAATCACGTCGTGTTATTCGCCTGCTCAATCTCTTTAATGGTACCTACCTGATGTCTCCTCTGTGATATGACTTTGAAACTACTTATCAGGTT GCATCTCAACAAGGCACCTACCTGGCCAAGTGTTTTAACCGGATGGAAGAATGTGAAAAGAATCCAGAGGGTCCTCTCAGGTACAGGGGAGAAGGGCGCC ACAGATTCAAACCCTTTAGGTACAGGACCATATTACCTTACTAGCTTTTTGCTTTTAATCATTAATACATGATACTTGATATAGTGATGAATGGCTCCAA GTTTTTCATTAGTTGGTCAAGATATACCTCATTATTACATTGTTGACTGTTCCTCCAGGTACAGGCATTTAGGTCAGTTCGCTCCTTTGGGAGGAGAACA AACAGCTGCACAGCTTCCTGGAGATTGGGTTTCAATTGGACAGAGCAGTCAATGGCTGTGGTATTCTGTCTACGCAAGGTATGGTGTTCCTTTTGTTGTC CCACGTCCGGTCTCAAGTCATGTCCCGGAACAATGACAATGAAACAAATATTTAAATTTTTTATTAGTGTGAGACATGATCAAGATCTATGTTTGTTCAT TTTCTTAGTTGTATTCCTAAAACTGACAGACTGGAGAGAGAATTTAGAAGAACTTGTACAAAGCTTATTTGGACTTACAAGAACATATTGAGAAATTAAA TCTATAAAAATAATTTATAGAAATAGCTTGTGAGTTTATGATAAGCTCAGTAACAAAACCTATGGAAAAAAAAGTTTTTTAGCATATTTTCAAATTTCTT ATTGAATAAACATTTAATTAAGGTGTTTAGAGATGCATGCTTATAATGCATTATGATCACCAAGTTATTAAGGCTTTATTTAATGTGTTGAACAGCAAGC AAGTGAGTTGGCGCACAAGGGCATTAGTAGTAACAGACTGGACAAGACGTTTTATTTTTGGGAGGGACTCAAGTCAGATCTAAAGGAGTTTTAACACGTT GCAGAGTCTTGCCATAGCAACAATGCAGAGCTCGTCGAACCTAAGTTTATTTTAATACAAGAAAATTTTGTTTCAGTTCATGATTCTTTGAATAAGTACA ACAGACTCCTATTGTGGATGTCACAATTGCATTGGGATATGTATTATCATGTTCTACCACTTTCAACTATCAAGTGTGAATTTCTTACATTCCCCTTTCC CTTATCTTTTCCTGCTTTTGGTGTTAGAGTTGCAAATCTATGAATCTAGGAGATGTTTAGTAATGTTAGCTTCTAATGCCTAATCATTTATGTTATTTTT GAATAGTTTTGTTATTTTCCTATAAATATGTTAAGATATGATCATAACTTCACATATAAAGCTTGTTTGCAAAACATTGGAAATAATTATATAATTGAGG TTGATGAATGGAGTGTTGGCAGACAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_137696; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_478172
| Blastp | External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial from Arabidopsis with 80% of identity |
|---|---|
| Blastx | External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial from Arabidopsis with 73.76% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT4G05020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431453.1) |
| Pfam | Pyridine nucleotide-disulphide oxidoreductase (PF07992.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |