| Id Trinity | TRINITY_DN44435_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_478179 |
| Sequence | CATGAAGGCGTTATTCATCCCCATGTTGCGTAGCACCTTCCTTTCTTTCTTTCCCACCTCTCCTGTTTCTATCTGACCCCACACACTCTCTCTATATATA TATTTGAGAGCTCATAGTCATATACCTATACTTTCTCTCTCCTCGCTCTTTCTCACTGTTTTCCTGAAATTGTGGACACAGATTTTATCTCCGATAATCG CGGTGTACAAAAATGCACAATTTCACTTTCTTCCAACGAGTTTCTAAAGCTTTCCGTAATCATGACTCTCACATCAAGCTTCTTCTGCTATGCACCACCG TAACCGTAAGTGGTGGCGGACTTTTGGCATATGGTGATGCTGTTGCTGCATCTGAAGCAGCATTGGTGACAGAAAAGAAGAAGGTGGTGGTACTTGGAAC TGGCTGGGCTGGAACAAGTTTCTTGAAGAATCTAAACAACCCAAAATATGATGTTCACGTGGTGTCTCCTCGCAACTACTTTACATTCACTCCTTTGCTT CCAAGCGTTACTTGTGGCACAGTCGAGGCCCGCAGCATTGTTGAACCCATTCGCAATATATTTAGGAAGAAAAAGGGGGACATTCAATTCAGTGAAGCTG AATGTCTCAAGATTGACGCAGCGAACAGGAAAATTTACTGTCGGACTAATATAAGCGATAACGAGAACGAATTTGTTGTGGACTATGACTACCTTATCAT AGCTGTTGGAGCAAATGTCAACACATTCAATACTCCTGGGGTGGTGGAGAATTGTCATTTTCTGAAGGAAGTTGAAGATGCGCAGAAGATTAGAAGAACA GTTATTGACTGCTTTGAGAGAGCAAGTTTGCCTGGTTTAAGTGAAGAAGAGAGGAAGAGGGTTCTTCATTTTGCTATTGTTGGAGGTGGTCCAACTGGAG TGGAGTTTGCAGCCTCACTTCATGACTTTGTTACCGAGGATCTGGTCAAGTTATATCCTGGTATAAAAGATTTAGTTAAAATTACGCTTCTGGAGGCTGG AGATCATATTTTGAGCATGTGAGTGTGAACATCTCGTTATACCTTTGTTCTTACTAGAAACTTATTCAAGGATGCTTTGGTGTCTACTATTTGTGTTTAT GAGTAGGCATTGGGAAGCAATTGATTCAGACATGGATTTCATGTGTGAGTTTATGGTTTTGATGCTTAGAACATTACTATGAACTTCTCCTTTTTAGTAA CATGAAAACCTTAATGACATGTTTCATCATTAATCAAGAGAAGGAGCTATAATTAATCTAATATGTATATATTAGACACCAAGAAAATAACTAGCAGTAT AAAGTAAGCTCTAGGCTGTCAAGTTAACAATTGTTAAAACTTGAAGGTTAGATGCTTTTAAGCAAAGGTAGGGCTCCTATAAAGTGAAATGCATATTAAC ATTTCTCTCAGTCTCATGTCCACATGGAAAATAGAGTAGAAAGCTGAAATGCAAAAGACAACTACGAGGACTTACTAATGAGGCAGTTATTGAAGAGGTT TGGTGGTGGAGTAAAAGCCTAATCTAACCATCTATACCTTATTGCAAAGGAGTTATTGATGTTTGAGTCTGAACTCAAGATTGATGTGCCTCTCATGTTC AATTTTCAGGTTTGACAAAAGAATCACTGCTTTTGCTGAAGACAAGTTCCGAAGAGATGGTATTGATGTGAAAACAGGATCCATGGTTGTGAAGGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_137696; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_478179
| Blastp | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial from Solanum with 64.62% of identity |
|---|---|
| Blastx | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial from Solanum with 64.62% of identity |
| Eggnog | Nadh dehydrogenase(COG1252) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431453.1) |
| Pfam | Pyridine nucleotide-disulphide oxidoreductase (PF07992.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |