Ll_transcript_478147

• Id Trinity: TRINITY_DN44447_c0_g1_i4
• Name Transcript: Ll_transcript_478147
• Sequence: ACACTTTTCACTCTCTTCTGTTCCTCACAATATAAACCAAAACACATGCTTTAACATTCTATCTACTTTCATTATTCAATGGCTTCTTCTTTTTCCCTTT ATATATCAACTCAATGCTTCTTCTCCAATACCCAGTTCAAAGGTTTCCGCCATGGTTTTTCATGGCGACCCACTTGTCCAGTTGATTCTCATGTTGAAAA CAAAGTTCGACCCATCAAAGCTTCGGTTGATTTATCTTCTTTTCCATTGTTTCAGACCCCCAAAGTTGAAGAGCCATCTTCTGATGCGTTGGAGCCTGCA GATCCTGATTTTTACAGGATAGGTTATGTCCGAAGCGTGCGAGCTTATGGAATTGATTTTAAGGAAGGACCGGATGGGTTTGGTGTTTATGCTTCAAAAG ATGTAGAACCTCTTCGCCGAGCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGTTAACTATAAGCAAGAAGCTCCCGTGGATGTTTTTCCCTGATAT AATCCCAGTGGGTCATCCAATATTTGATATTATCAACTCGACAAATCCAGAGACAGATTGGGACCTACGGTTAGCGTCCCTCCTCTTATTCTCATTTGAC TGCGAAGACAACTTTTGGCAGTTGTATGGTGACTTTCTACCCAGTGCAGATGAGTGCTCTAGCTTACTTATGGCTACAAAGGAGGAACTTTTGGAGTTGC AAGATCCCGATCTTGCTTCTACAATAACAAACCAGCAACAACGAGCCTTAGAATTCTGGGAGAAGAATTGGCACAGTGGTGCACCTCTTAAAATAAAGCG TCTTGCTCGTGATCCTGAAAGGTTCATTTGGGCAATGGCTATTGCACAATCACGATGTATTAACATGAACATGAGAATTGGTGCACTAAATCAAGAAGCA AATATGCTGATTCCTTATGCTGACATGCTGAACCATTCATTTGAGCCGAATTGTTTTTTCCATTGGCGTTTTAAGGACCGGATGCTTGAAGTTCTTATAA ATGCTGGACAGCAGATTAAAAAGGGAGAAGAGATGACAGTTAATTACATGAGCAGAGAGACAAATGATGTGTTAATGCAAAGATATGGATTTTCATCTCC TGTGAATCCTTGGGATGTGATCAAGTTCTCAGGCAACACACATATTCATTTGGACTCCTTCTTGTCAGTCTTCAATATATCTGGCCTTCCAGAAGAATAT TACCATAACAATCGTCTATCAAACGCTGGGGATACTTTTGTTGATGGAGCAGTCCTTGCGGCAGCACGAACATTGCCGACTTGGTCAGATGGGGATGAAC CCCCAATCCCTAGTGTGGAAAGAAAGGCTGCGAAGGAGTTACAAGACGAATGCCAACGTATGCTTTCAGCATACACTACAACGGCTAAGCAAGACCAGAA ATTGCTAGATTCCATGCCAGAAGCTACAAGGACACTTGAAGCTGCAATAAAGTATAGATTGCACAGGAAATTGTTCATTGAGAAAGTTATCCAAACACTG GAGATTTATCAAGAGAAAATACTGTTCTGATCCCAATATGCTAATTTTCAAGTAGTTAGAAATTTTTTGTAACACTGGCACATACCTGTATCACAAAAAA ATGTTTTTATCCATGAATTGCAAGCTCAGTTCTATTAAATTCATTTTGTAATGTTTTGCCTTTTTTTCTGTTCATTGGTCAAGCTCTTAGCAAAGTTAGA ATATAGTTGTCAAAGGAATTAAAGAAATTCAAAGATTTCATCTTGCCTTTATATGTGGATTATTTAATTTAGTGAATAGAAACATCA
• Tissue: pods
• Gene name: LI_gene_137713;
• Additional information: details;

Expression of Ll_transcript_478147

FPKM

• PAB: 3.8
• PNAB: 10.4
• PS1: 8.6
• PS2: 6
• PS3: 7.6
• PW1: 13.4
• PW2: 10.2
• PW3: 6.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478147

• Blastp: Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 from Arabidopsis with 71.81% of identity
• Blastx: Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 from Arabidopsis with 71.81% of identity
• Eggnog: Rubisco LSMT substrate-binding(ENOG410ZB51)
• Kegg: Link to kegg annotations (AT4G20130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426291.1)
• Pfam: SET domain (PF00856.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;