Ll_transcript_478028

• Id Trinity: TRINITY_DN44455_c0_g1_i3
• Name Transcript: Ll_transcript_478028
• Sequence: GGCTACGCAATCTTATCTTCTTAACTCTCTTTATGTCACTGGATTGCAACCTTCAATTCTCAAGCCAACCAATTTTGGATTCTCTTTTATTTAATACCCA GTTGCAAATATCTGCATTTTTTCTGATTGGAGTGCTTCCAGCATCTGAATTTGGAAACCCATTTAAGTTTTTTCTTTCAATTGATATTCATGCTAGCTTT TGTATAGAGTTTAGAACGTGTAATGATGAAAAAAAGGTGTAGGGAGAATTTAGAGTTTGAAAGCTGAATTTTTTTTATGTTAGCATGTGTAAATTGTAAT GCCTTGCTTTTAATAATTTTGGTATTTTTAATTTTAGATTAAAGAGGAAAAAAAACAACTTGTGTTCTTCATTGTGTGCCTTGGTTGGTCTGCATAGCTT AATATATGATGGTAGCCCAAAGTGAGTAGAGGGAGCAAAAAAAATTGTTTTTTGTGAATAAAATAAAATTGATACCTCTACCTTTTAACAAGAAATCATG AGAATTAAAGAAATGTTGCTTCAGAATGTAAGACAATGTGAACCTGTGATTGTTGGTAAGGTATGGCATATTAGCTTTGCTAATTGGTGGCTTTCTCTCT CACTGGCATGAAGGTTTTCAAAATGTTTAGGGGAGCCGTGGCTTCCCCCTATTACATGATGACCGATGCATTCCAAAGCCGCGATATAGGGATTGAAAAA TCCAATTATAATTATGAAAACTGTGTTGGGCATTCTAGAGTCTCTCCTGAAAAAGAAGTGAAATTTCTTCGTTTTTTCTCCCTTTGATGATATGCCCATA CAGTATTTCCAAAAAAGTCTACATGGGAATGCTTTTCTTTTTTGCCATATGATGCCTGATTAACCTGCATTTTGTGGTTTCTATCTATAAAACATAGTAG GTAAAGCATGAGAAAATTATATTTCTAAATTAGAGCCTATCCTTCTCATATTATCTTTGGTTTTGATCATTGTTAAGGAAAATTACAATTTGTCATTCAT TTATCTTGTGATGTTGATTGAACTCAGCTTGAATTGGCTCTCATGTTTACATTAAAATATTGATATATTGAGTAATGATGCTCCTATTAAAACAAAGTTA CTAGCTCCACATTGTTTCGCTTGGATATGCAAAAGTTTTATTCTTGTGTTTATTGTGTCTATCTTTGTCCAATTTGTTTCTGGTACATTAAATTTTCCAG TAAGCTAAATCACTTCGCTGACCTTTGAAAACCATACAGAGTTTACTTTTTGCACTTCAAAATTATCCTGTTATTTTTCTCAACATACTTTCACATTTCA ATTGTTGCAGCAAAGTTCAAAATATCCTACTAAACGAAAGGCGAATCCCAGTGCTTCGGGAGCCGTGCAATGCTGCTCATGTCACACAGAAATATTGTAT GCAGCTACAATACAGAATTCTCTTGATTCAGATGCCTTGAACACTCTCAAACTAAGCATACCAGGAACATTATGTCCTTCCACAGATTTCTTCTCCGGGT TGGTTCTTGCCGATCTGGATCCTGGTACTGCCAAGTTAGCTATTGGATTTCTAGGACCATTTCTCTCAGCTTTTGGTTTTCTTTTTATCTTGAGAATAGT CATGTCTTGGTACCCAAAACTCCCTGTGGGAAAGTTTCCATATGTAATAGCTTATGCTCCCACAGAGCCACTTCTGAGTCCTACCAGAAAAGTGATTCCT CCCCTTGCTGGTGTGGATGTTTCTCCTGTGGTCTGGTTTGGATTGATCAGTTTTCTTAATGAAATATTGGTTGGTCCACAAGGATTACTTGTTCTCCTTT CCCAAAAAATCAATTAGCTTCTATATTTATAGTTTGTGAAGAATGAGATATGGTGATATTTTATCCAATCTTGTTGGATTTATACATAAGTTGCATATGT GAATAACAATGTTTTTCTTCCTTCACATTTGCCATCTAGAATCATGTTTGAAGATATAAATATTGTTTAGACTTTAGACTTCATACTAACATGTCTGACA ATTTCATATAATCATGTTTGGAGCCTCTAGAATCAAG
• Tissue: pods
• Gene name: LI_gene_137728;
• Additional information: -

Expression of Ll_transcript_478028

FPKM

• PAB: 6
• PNAB: 3
• PS1: 3
• PS2: 2.7
• PS3: 2.4
• PW1: 3.6
• PW2: 3.7
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478028

• Blastp: -
• Blastx: Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic from Arabidopsis with 81.65% of identity
• Eggnog: integral membrane protein(COG0762)
• Kegg: Link to kegg annotations (AT5G36120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449789.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;