Ll_transcript_478017

• Id Trinity: TRINITY_DN44460_c0_g1_i3
• Name Transcript: Ll_transcript_478017
• Sequence: ACGGAATAAATAATACGAGTAAAAAAAGATTGCACACTGCACAAGGCTCCTACCTAGAGGGGTATATTTTCTACTTTAATTATGAGATATTGTTTCGCTT AACCTATCTGGCTTTTAACATTTAAATGGCTTTCATCCAGAAAAACAATATCAAAAGGCATCATTTTAGTATAATATCTGTAGTTGTAGGTATAACTTTC TGTTTACTTTTAACTATTGCACATATGATATATCATTTCTTTTGTCAATGCATTGCAATCTCTGTGAATTCGATTTCAGGTTATGGTCTTGGATTATAAG CTTACATATCCCAGTGGGACAGCCACAGCGATGTTGATTAACAGCTTCCATACTAAGAGTGGAGCAGAACTTGCCGGGAACCAAGTTCGGCAACTGGGCA AGTATTTAAGCATAAGTTTCTTCTGGAGTTGCTTTAAGTGGTTCTTCAGTGGCGTTGGAGATTCATGTGGATTTGACAACTTCCCTAGCTTTGGTTTGAC ATTGTTTAAGAACACATTCTACTTTGACTTCAGTCCAACCTATGTTGGATGTGGTCTTATCTGTCCTCACTTAGTCAATTGTTCAGTTCTTCTCGGAGCT ATCATATCGTGGGGCTTTCTATGGCCGTACGTCTCCTCACATGCTGGGGACTGGTATCCAGCTGATCTTGGTAGCAATGATTTTAAAGGCCTTTATGGAT ACAAGGTATTCATATCTATTGCCCTTATCCTTGGGGATGGTATTTACAATCTGGTCAAGATTATACTAATAACTGCTAGGGAGATGTGGAGGGCAAGCTC CAGACAGAACACCCTTCCTGTTGTGACAGAGATTCTTGATGATGAGAGTTCTCAACTGCAATCAGAAAAAAAGAGGAAGGATGAAATATTTTTAAAGGAC GGGATACCGACCTGGTTCGCAGCCTCTGGATATGTTGGCTTGGCTGCAATATCGATAGCAACAATACCTATTATCTTCCCTCCTCTCAAATGGTACTTGG TTCTTTGCTCTTACATCCTTGCCCCTTTCCTTGCCTTCTGCAACTCTTATGGCACCGGGCTTACAGACTGGAGTTTAGCCTCCACTTACGGGAAGATCGG TCTTTTCATCATTGCGGCATCAGTTGGCCCAAATGGGGGAGTAATAGCAGGAGTGGCATCATGTGCTGTGATGATGTCCATTGTTGCAACTGCTGCTGAT CTCATGCAGGATTTCAAGACTGGTTATCTCACTCTCTCGTCGGCAAAATCCATGTTTGTAAGCCAGTTGATAGGAACAGCCATGGGTTGTGTAATTGCTC CTCTCACATTCTGGATGTTCTGGACTGCCTTTGATATTGGCTCACCGGATGGCCCTTATAAAGCACCATATGCTGTTATATTCCGGGAAATGGCCATACT AGGTGTCGAGGGATTCTCGGAGCTTCCAAAGCATTGCCTGGCTATGTGTGGCGGTTTCTTTGTTGCAGCTTTGGCTATCAATCTTATAAGAGATGTAACT CCCAAGAAGTTCTCACAGTATATACCTATCCCAATGGCCATGGCAGTTCCGTTTTACATCGGTGCTTACTTCGCAGTTGATATGTTTATCGGAACAGTGA TATTATTTGTCTGGGAGAAGTTGAATAAGAAGGGTTCAGAGGACTATGCTGGAGCAGTTGCTTCTGGTTTGATATGTGGTGATGGGATATGGACAATTCC TTCTGCAGTTCTCTCTATTTTGAGGATTGATCCACCCATTTGCATGTACTTTGGTCCTTCTACAAGCAGCTGAGTTTGAAATCATCACCTAGTCTCTCTA AAACTAAAATGTTTATAGTCCTTCATGTTCTGTTTGCGAGTTAAGTTTTCAAAGGGAAGAAAAGACAAATGAAGGCTTTAGAGCTTTCTCACAAGTGTAT CTCATGACTCTCAAGCATTTCATTTCCTTCCTTCCCCTTAAAAATCTAACTCACAAACCGACCCTAAGTATGTGTAAATATCTGAAATCACTATTTCATT TCCTCTATGTATCATTGCATGTGTCTACCAAAATATTTAGGGAAATTAATTTGTCCCTTGAATGTAAAGGGAAGGCATAAAGAATGGAAGCGTGCCTTAA CTTCAATTTCCTTTCATTTCATTACTTCAAATGTGCTTCAGTTCAGAGATTGGAATGTGCTAGTCTTATACTAGTATATATGAAGGTAAAACCACTCTGA TTATTCAAATAAATGCCCACATTATTATGAAA
• Tissue: pods
• Gene name: LI_gene_137738;
• Additional information: details;

Expression of Ll_transcript_478017

FPKM

• PAB: 0.4
• PNAB: 0
• PS1: 0.3
• PS2: 0
• PS3: 0.4
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_478017

• Blastp: Probable metal-nicotianamine transporter YSL6 from Arabidopsis with 81.49% of identity
• Blastx: Probable metal-nicotianamine transporter YSL6 from Arabidopsis with 79.57% of identity
• Eggnog: oligo-peptide transporter(COG1297)
• Kegg: Link to kegg annotations (AT3G27020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458316.1)
• Pfam: OPT oligopeptide transporter protein (PF03169.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;