| Id Trinity | TRINITY_DN44494_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_477968 |
| Sequence | AAATAGTTTAAGAACCCTTTCCAAATTTCTCTTTCTACAATCTCTGACTTTGTATAACCTCTGACTTTCTGTTTCTCTTCTCTCACATTCATCACAAACT AAGGTCCCTAGTTATTACCCTTAGTGCTTCCTTCACCCAAAATTTTCTTAGATATATATTTTAACTCATCACAAAATATTTCTTATTTTTTGAATTCTTT CCCCTACAATAGTTTTAGTCCCTGTTTAAGAAAGTCATCGTTTTAGTTTGTTCTTTTTAGTGTTGGTTTTTGAGGTGGTTGACTTTAGAAATGGAGAATC AACAAAGAAGTGATGAAACAGCTGAGACGTTTACATGGACGATCAAGAGCTTTTCTAAATTGCGCAACAAGCTCTACTCTGAGATTTTCTTCATTGGAGG CCATCCATGGCGCCTCTTTATATTTCCAAAGGGTAACAATGTGGACTACTTGTCAATTTATTTGGATGCTGGTGACTCTGCTAATTTGCCTTATGGCTGG AGCAGATTAGCAAAATTCAAGTTGAGTCTAATTAATAAGGTCAATAGCAAAATGACAAAAACAAAAGAAACTGAACATGAATTCAATGCAAAAGAGGATG ACTGGGGTTTCCCTTCATTCTTATCTTTACATAAAATTTTGGACCTTAGCAAAGGCTTTATTGTGGATGATACTTGTATAATTGAAGCTGGGATTTTTTT TACCAAACGAGAACATGAGAATCAGGTCGATCAAGCAGCCAAAACTGCTATTGTTACTCCGGTTTCAACACAAGTTAATGTTGTGTTTGATAATCCTTCA CTTGAGGAAACATCCTCTACCTCATTGGGCGAACTCATGGATTTTAGGGGATTAGGGAAAGTAGAACAAGCATTTGTTCCGCTACTGGAAGAAGTATGTT CACGACACCCGTCTCTTATTGAATGTCAGCAGAAGAGAAGTCGTAGCTTTACTGAATGGGCATTCATAGCTTTGGGCCGAGTTCTACATTTCCTGAAGAC TAAAAAAATTAAAGATATGGATGATGTTCTCTTTATGCATCTTCAAATTTTATGGGAGGACTTTAACGCGATTAAAGTTAGGTCAAACCGAGCGTGTGAG ATCTTATGTTCAAGAACGGAGCGTTCGAGTCCTGTATTTGGAAGTGTGTATGTAACATACATTCTGTTCATTATAGTGAATAAAAATCTCCCGAGATCAG AAGGGGAGGCCTTGATGTAGTTTGCTAGTGGACCCACAAAGGAACCAGGATAAAATCCTTGGCACACGCTTTTCTTTCCCTTTCTCTCTTTAAGTTTCAA TATCATATATAGCTTGTTGTATTTGTTGTGTTATATACTTTGTTAGTCAGCTATATTTGCTTATACTCTGATTGTATTACTTTGTCTTTACTGTGTTGAA GAGTCGGTAACTTGTCATGCAAGAAACTGAATCTGCCTTGGTTGTTTTAGGTGCATTAATCGATTAAGTCATTGTTTTAATCGATTAACTGTGGCTTTTT TCAGAATAGGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_137802; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_477968
| Blastp | Ubiquitin carboxyl-terminal hydrolase 12 from Arabidopsis with 50.71% of identity |
|---|---|
| Blastx | Ubiquitin carboxyl-terminal hydrolase 12 from Arabidopsis with 50.71% of identity |
| Eggnog | ubiquitin carboxyl-terminal hydrolase(COG5077) |
| Kegg | Link to kegg annotations (AT5G06600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426717.1) |
| Pfam | MATH domain (PF00917.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |