Id Trinity | TRINITY_DN44512_c0_g1_i2 |
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Name Transcript | Ll_transcript_432745 |
Sequence | GGCCATTTCCAATGCAGCAATATCTACACAGCGTGGAAGCAGAACCACCATATACAACTCTTCTGACTTTGTTGCTCTCTTCTTCTAATGAATTAGCGAT ATAAACCCTAAACCAATTCAACTACACTTACAGCTACCACTACTCTCTCACAATGTCACCCATTGCTCTAACTGCGTCAGCCACAACATCCCTCCTCGCT TTTCACCGAGGGGCAAAGCAATGGAACAAGGTAATTCCGAGTTATTGGAGAAGAACCAGTGGAATTAATTCATCCTTATTCGCTAATTCTCAGAGGAAAC CCTTGCAATTGCGATTCTCAACTTCAGCGGCGAATGGAAGCAATGGAGGTGTTTCGGAAGAGATAAGTGGAAGTGAAAAATTGCCGATCAATTTCGTATG GTCTGATAATAAGAAGCCTAGGGTTTGTATATTAGGCGGTGGATTTGGTGGTTTGTATACTGCTTTAAGGTTGGAATCACTTGAGTGGCCTGATGACAAA AAACCACAGATTGTTCTTGTCGATCAGTCTGAACGCTTTGTTTTTAAGCCAATGTTGTATGAGCTTCTCTCTGGAGAAGTGGAGGAATGGGAAATAGCTC CTCGTTTCTCGGATTTGCTGGCAAACACTAGTGTGCAGTTTTTCAAAGACAGGGTAAAACTTTTGCAACCCTCTGATCATTTGGGAACCAATGGATCCAA CGCTTCTAGCTCTGGCGGAACTGTTCATCTTGATAGTGGCCTTCTTATTGAATATGACTGGCTGGTTCTTGCATTGGGAGCTGAAGCTAAACTGGATGTT GTACCAGGTGCAGCAGAGTTTGCATTTCCATTCACAACACTAGAGAATGCACGAAAAGTTAATGATAAATTAACAACATTAGAGAGAACGACCTTTGGAA AGGACTTCCAAATTAGTGTGGCCATTGTTGGTTGTGGATACTCTGGAGTTGAGTTAGCTGCAACAGTAGCAGAGCGATTACAGAATAAGGGAATTGTTAG AGCAATTAATGTTGATCCAATTATTTGCCCAAATGCCCCACCCAGCAATAGAGAAGCTGCACTGAAAGTTCTTTCATCCAGGAAGGTTGAACTTTTGTTG GGTTATTTTGTTCGTTGTATTCGGAGGGTGAGTGAATCAGACTCATCAGATACCTTGGCCGGGGTAGATGAAAATCACATTGAAGTAGCACATAATTTGG AGAAATATATATTGGAGCTGCAACCTGCTGAAAGGGGGATACAAAGTAAAATCATTGAAGCAGATCTAGTGTTATGGACTGTTGGATCTAAGCCTCCTCT CCCTCAGCTGGAACCTTCAGATTTTCCATTTGTACTTCCACTTAATGCCCGGGGACAAGCTGAAACAGATGAAACCCTACGTGTTAAGGGTCACCCACGA ATATTTGCCCTTGGCGACTCTTCTGCGTTGAGGGATTCAAATGGAAGGATCCTTCCCGCCACTGCACAGGTTGCTTTTCAGCAAGCTGATTTTACGGGTT GGAATCTGTGGGCTGCAATCAATGGACGACCCCTTTTACCATTTAGGTTTCAAAATTTAGGAGAGATGATGACCCTCGGTAGATATGACGCTGTCATTTC TCCTAGTTTTGTTGAGGGGCTAACCCTGGAAGGTCCTATTGGCCATACTGCCAGGAAGCTAGCATATTTGATCAGGTTACCAACAGATGAACATAAGCTT AAAGTGGGGATTAGCTGGCTCACAAAATCTGCTATTGATTCAGTGTCATTGCTGCAAAGTACCTTAACCAAGGTCCTCTCCAACTCATAGCTCATTCAAA TCGGAGGGATTTGTGTTATAACTACCAATTGTGATGAACATTTCAAACATTTGATCATTTGTCTTTTCTAGAATCAATTATCAGACAGTAAGGAGTCTCA TTAAACTGGTCATATATTTTTATATATAAAATCATGACTCCAAACTATTTTCTCGC BLAST |
Tissue | pods |
Gene name | LI_gene_137833; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_432745
Blastp | Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial from Arabidopsis with 68.9% of identity |
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Blastx | Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial from Arabidopsis with 70.9% of identity |
Eggnog | Nadh dehydrogenase(COG1252) |
Kegg | Link to kegg annotations (AT5G08740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458586.1) |
Pfam | Pyridine nucleotide-disulphide oxidoreductase (PF07992.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |