Id Trinity | TRINITY_DN44555_c0_g1_i2 |
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Name Transcript | Ll_transcript_432739 |
Sequence | TAGCAATTAAATTGAGTTGTTGAGGTGTGTGTCTTTACTTGTTCGCAATCGTTTTATTCTCTCTTAGGGTTTCGCGTTCTCTCTCACTCCCAGAGTCTCA GAGTCTGAGAGTCTCATCTCAGTCTCACTCAGCCAGGTTCCACCTCAAATCTAATTTACTACTGCAATTCCTCCATCCGCGGTAATTCATTTTGAGATTT CAAATGAACCACGCTTTCCTGTGTCAATACGTATAGGATTGCTGACATTTTGTGAGATTTGGAGCATTATTCACTCCCGTAATCATGGCAAATCTAGCTT TGACTAACATACTGGAGAAGATGACTGGGAAGGATAAAGACTTCAGATACATGGCCACATCTGATTTGCTAAATGAGTTGAATAAAGACACATTTAAGGC TGATGCCGAGTTGGAGATTAAATTGACAACGATCATCATACAACAGCTTGATGATGCAGCTGGCGATGTTTCTGGACTAGCTGTCAAATGTCTTGCTCCG CTGGTGAGGAAGTCAAATGAGCGAATGGTTGTGGAAATGACGAGTAAATTATGTGACAAATTGTTGAATGGGAAGGAACAACATCGTGACATTGCTAGCA TAGCTCTGAAGACAATTGTTGCTGAAGTTTCCACTCAGTCTCTTGCACAATCTATTCTTCAGTCTCTCTCGCCACCGCTGATAAAAGGAATTACTGGCAA AGGCATGATCACAGGGATAAAATGTGAATGTCTAGATATTTTATGTGACGTCCTTCATAAATTTGGGGATCTAATGGTGGCTGACCATGAGCTGTTACTC AGCGCTCTGCTGTCTCAGTTGAATTATAATCAAGCTAGTGTGCGCAAGAAGTCCGTTGCATGCATTGCATCTCTTTCTTCAAGCTTTTCAGATGACCTGT TGGCAAGGGCAACAGTTGAAGTTGTCACGAATTTAAAAAAGAAAATTGTCAAGTCAGAAATGACACGTACGAACATTCAGATGATTGGTGCTTTGAGTCG TGCTGTGGGTTATCGGTTTGGACCTCATCTTGGAGACACAGTTCCTGTGCTAATTAATTACTGTACTAGTGCCTCAGAAAATGACGAAGAGCTTCGTGAG TACAGCTTGCAGGCACTAGAAAGCTTTCTCCTAAGGTGTCCAAGGGATATTTCATTTTACTGTGTGGATATTCTTCATCTCACTCTAGAATATTTAAGTT ATGATCCAAACTTCACTGACAACATGGAAGAGGATACCGATGATGAAGGTCATGAAGATGAGGAGGATGATGAAAGTGCCAATGAATATACAGATGATGA AGATGTCAGCTGGAAAGTTCGAAGAGCAGCGGCAAAATGCCTTGCAGCATTGATTGTTTCTCGTCCTGAGATGCTTGCAAAGCTGTATGAGGAGGCTTGT CCAAAACTGATTGATAGATTTAGAGAGAGAGAAGAAAATGTGAAGATGGATGTATTCAATACTTTTATTGAGCTCTTGCGTCAAACTGGAAATGTTACAA AAGGACAGATTGATATAAATGAAATGAGTCCTCGGTGGTTGTTAAAGCAAGAAGTGCCAAAAATTGTCAAATCTATAAATAGGCAGTTGCGTGAGAAATC TTTCAAGACAAAGGTTGGTGCCTTTTCTGTTCTAAAGGAACTAGTGGTTGTCTTGCCGGATTGTCTTGCAGATCACATTGGGTCACTCATTCCAGGAATT GAAAAAGCATTAAATGACAAATCTTCTACCTCAAATTTAAAGATTGAAGCCCTAATATTTACAAGATTGGTGTTATCTTCACATTCTGCTGTTGTTTTCC ACCCGTATATCAAGGCTCTTTTGGCTCCTGTTCTATTAGCTGTTGGTGAGCGTTATTACAAGGTCACTGCAGAGGCCTTGAGGGTCTTTGGGGAACTTGT CCATGTTGTGCGTCCCAACATTGAGGGCTCTGTTTTTGATTTCAGACCATACGTTCATCCCATATATAATGGCATTATGTCTCGCTTGATAAACCAAGAT CAAGATCAGGAGGTTAAGGAGTGTGCTATCTCCTGCATGGGCCTTGTCATATCAACATTTGGTGATCATCTCAGTCCAGAATTACCTGCATGCCTTCCTG TGCTTGTTGATCGGATGGGAAATGAGATAACCCGACTTACAGCTGTAAAGGCTTTTGCTGTCATTGCTGCTTCTCCACTTCGGGTGGATTTATCATGTGT TCTGGAACATGTAATTGCAGAGTTGAATGCTTTCTTACGAAAAGCTAATCGTGCACTAAGGCAGGCAACCCTGGGAACCTTAAATTCACTTATAGTTGCA TATGGTGATAAGATTTGTTCATCTGCTTATGAAGTTATTATTGTAGAATTGTCGGGACTAATTAGTGATTCTGACTTGCATATGACGGCACTTGCCTTGG AGCTCTGCTGCACCTTAATGAAGGATAGGAGATCAAGTCCTAGTGTTGATTTGGCTGTTAGAAACAAAGTTCTTCCTCAAGCACTAACATTAATCAAAAG CTCATTGCTGCAGGGGCAAGCTCTTTTGGCTTTACGGAATTTTTTTGCTGCTTTAGTCTATTCTGCAAACACTAGTTTTGATTCTCTTCTGGAGTCACTA CTTGCTAGTGCAAAGCCTTCCCCACAGTCAGGCGGCATTGCAAAACAAGCATTGCATTCAATAGCCCAATGTGTGGCTGTTCTATGTCTTGCTGCTGGTG ATCAGAAGTGTTCATCTACAGTGAACATGCTTACCAAAATGCTCAAGGACGACAGCAGTTCTAACTCGGCTAAGCAGCACCTTGCACTTCTATGTCTTGG AGAGATTGGTAGAAGGAAGGATCTAAGTGCACATGCCCATATAGAAAATATTGTCATTGAGTCCTTCCAATCTCCATTTGAAGAGATAAAATCTGCTGCT TCTTATGCTCTTGGTAACATTGCTGTGGGCAATCTTCCTAAGTACTTGCCATTTATCTTGGACCAGATTGACAATCAGCAGAAGAAACAATACCTCTTGC TTCATTCTTTGAAAGAGGTAATTGTAAGGCAATCTGTTAATAAAGCTGAATTTCAAGAGTCTAGTGTTGAGAAAGTACTTAATTTACTCTTCAACCACTG TGAAAGTGAGGAAGAGGGGGTGCGCAATGTAGTGGCTGAGTGTCTGGGAAAAATTGCGCTTATTGAACCTGTAAAGCTTGTACCTGCACTTAAGGTACGA ACAACCAGCCCAGCTGCATTTACTCGAGCTACAGTTGTCATTGCTGTGAAGTACTCTATTGTTGAACGTCCTGAGAAGATTGATGAGATCATATATCCGG AAATATCATCATTTCTTATGCTTATCAAGGATAATGACCGACATGTTAGGCGAGCTGCTGTCTTGGCTTTAAGCACATTAGCTCACAATAAGCCAAACCT CATCAAGGAATTTCTTCCTGATCTGTTACCTCTTCTCTATGATCAAACTGTTGTGAAGCAAGAGCTGATAAGGACAGTTGATCTTGGCCCTTTCAAGCAT ATTGTGGATGATGGTCTTGAATTGAGGAAGGCTGCTTTCGAGTGTGTAGACACATTACTTGATAGTTGTCTTGATCAAGTGAATCCATCATCATTCATTG TTCCGTATCTTAAATCTGGTTTGGTTGATCATTATGATGTTAAAATGCCTTGCCATCTGATTCTCTCAAAACTTGCTGATAAGTGTCCATCAGCCGTGTT GGCAGTTTTAGATTCATTGGTGGATCCTCTATCGAAGACAATTAATTTTAAGCCTAAGCAAGATGCTGTTAAACAGGAAGTGGATCGTAACGAAGACATG ATTCGAAGTGCACTTCGAGCTATTGCATCCTTGAACCGCATTAGTGGAGGAGATTGCAGTGTCAAGTTCAAGAACCTTATGAATGAAATATCAAAATCAC AAACTCTCTGGGAGAAGTATTATTCAATTCGCAATGAATGATGGATAAACAGATATGCACATTGGAGTTGAAACCCATTGATGCATATTTAAAGGAGTCT CTCTGGACCAGTTACTTGTACTATAGGAGAAATCAATTTACGCGATCTACCATGGGAATGCTAGTGATGACTTCTTGTATAGGATAAAATATTTTGCCTT GTTTGCTGTTTGCATCTATCAATTAGCCACTTTCTTTATCAATTCACCACCGCAATTGCCTAGACACAAAGCAAAGTAGGAAAAAAGAGATTAACATTCA TGGATGAAATGTACTTCGGATATTTGTCTTCAATCTTTGTCCATCCTTATAGTTATGTTGTAACAAGTTGAGCTTACTTTAGAAGTGGTTGACGACGTTA GAAGTGGATTGTGCTTTAGACAAAATTTACCTAAGGGGCTATGATTGAACTTGAAAATAAATTAAAGGTAAATAAATAACTAAAATGATGGATGATACAA TGACAATAAAACTCAAACâBLAST |
Tissue | pods |
Gene name | LI_gene_137902; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_432739
Blastp | Cullin-associated NEDD8-dissociated protein 1 from Arabidopsis with 80.74% of identity |
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Blastx | Cullin-associated NEDD8-dissociated protein 1 from Arabidopsis with 79.43% of identity |
Eggnog | cullin-associated and neddylation-dissociated(ENOG410XPK4) |
Kegg | Link to kegg annotations (AT2G02560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440423.1) |
Pfam | TATA-binding protein interacting (TIP20) (PF08623.9) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |