| Id Trinity | TRINITY_DN44555_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_432741 |
| Sequence | TAGCAATTAAATTGAGTTGTTGAGGTGTGTGTCTTTACTTGTTCGCAATCGTTTTATTCTCTCTTAGGGTTTCGCGTTCTCTCTCACTCCCAGAGTCTCA GAGTCTGAGAGTCTCATCTCAGTCTCACTCAGCCAGATTGCTGACATTTTGTGAGATTTGGAGCATTATTCACTCCCGTAATCATGGCAAATCTAGCTTT GACTAACATACTGGAGAAGATGACTGGGAAGGATAAAGACTTCAGATACATGGCCACATCTGATTTGCTAAATGAGTTGAATAAAGACACATTTAAGGCT GATGCCGAGTTGGAGATTAAATTGACAACGATCATCATACAACAGCTTGATGATGCAGCTGGCGATGTTTCTGGACTAGCTGTCAAATGTCTTGCTCCGC TGGTGAGGAAGTCAAATGAGCGAATGGTTGTGGAAATGACGAGTAAATTATGTGACAAATTGTTGAATGGGAAGGAACAACATCGTGACATTGCTAGCAT AGCTCTGAAGACAATTGTTGCTGAAGTTTCCACTCAGTCTCTTGCACAATCTATTCTTCAGTCTCTCTCGCCACCGCTGATAAAAGGAATTACTGGCAAA GGCATGATCACAGGGATAAAATGTGAATGTCTAGATATTTTATGTGACGTCCTTCATAAATTTGGGGATCTAATGGTGGCTGACCATGAGCTGTTACTCA GCGCTCTGCTGTCTCAGTTGAATTATAATCAAGCTAGTGTGCGCAAGAAGTCCGTTGCATGCATTGCATCTCTTTCTTCAAGCTTTTCAGATGACCTGTT GGCAAGGGCAACAGTTGAAGTTGTCACGAATTTAAAAAAGAAAATTGTCAAGTCAGAAATGACACGTACGAACATTCAGATGATTGGTGCTTTGAGTCGT GCTGTGGGTTATCGGTTTGGACCTCATCTTGGAGACACAGTTCCTGTGCTAATTAATTACTGTACTAGTGCCTCAGAAAATGACGAAGAGCTTCGTGAGT ACAGCTTGCAGGCACTAGAAAGCTTTCTCCTAAGGTGTCCAAGGGATATTTCATTTTACTGTGTGGATATTCTTCATCTCACTCTAGAATATTTAAGTTA TGATCCAAACTTCACTGACAACATGGAAGAGGATACCGATGATGAAGGTCATGAAGATGAGGAGGATGATGAAAGTGCCAATGAATATACAGATGATGAA GATGTCAGCTGGAAAGTTCGAAGAGCAGCGGCAAAATGCCTTGCAGCATTGATTGTTTCTCGTCCTGAGATGCTTGCAAAGCTGTATGAGGAGGCTTGTC CAAAACTGATTGATAGATTTAGAGAGAGAGAAGAAAATGTGAAGATGGATGTATTCAATACTTTTATTGAGCTCTTGCGTCAAACTGGAAATGTTACAAA AGGACAGATTGATATAAATGAAATGAGTCCTCGGTGGTTGTTAAAGCAAGAAGTGCCAAAAATTGTCAAATCTATAAATAGGCAGTTGCGTGAGAAATCT TTCAAGACAAAGGTTGGTGCCTTTTCTGTTCTAAAGGAACTAGTGGTTGTCTTGCCGGATTGTCTTGCAGATCACATTGGGTCACTCATTCCAGGAATTG AAAAAGCATTAAATGACAAATCTTCTACCTCAAATTTAAAGATTGAAGCCCTAATATTTACAAGATTGGTGTTATCTTCACATTCTGCTGTTGTTTTCCA CCCGTATATCAAGGCTCTTTTGGCTCCTGTTCTATTAGCTGTTGGTGAGCGTTATTACAAGGTCACTGCAGAGGCCTTGAGGGTCTTTGGGGAACTTGTC CATGTTGTGCGTCCCAACATTGAGGGCTCTGTTTTTGATTTCAGACCATACGTTCATCCCATATATAATGGCATTATGTCTCGCTTGATAAACCAAGATC AAGATCAGGAGGTTAAGGAGTGTGCTATCTCCTGCATGGGCCTTGTCATATCAACATTTGGTGATCATCTCAGTCCAGAATTACCTGCATGCCTTCCTGT GCTTGTTGATCGGATGGGAAATGAGATAACCCGACTTACAGCTGTAAAGGCTTTTGCTGTCATTGCTGCTTCTCCACTTCGGGTGGATTTATCATGTGTT CTGGAACATGTAATTGCAGAGTTGAATGCTTTCTTACGAAAAGCTAATCGTGCACTAAGGCAGGCAACCCTGGGAACCTTAAATTCACTTATAGTTGCAT ATGGTGATAAGATTTGTTCATCTGCTTATGAAGTTATTATTGTAGAATTGTCGGGACTAATTAGTGATTCTGACTTGCATATGACGGCACTTGCCTTGGA GCTCTGCTGCACCTTAATGAAGGATAGGAGATCAAGTCCTAGTGTTGATTTGGCTGTTAGAAACAAAGTTCTTCCTCAAGCACTAACATTAATCAAAAGC TCATTGCTGCAGGGGCAAGCTCTTTTGGCTTTACGGAATTTTTTTGCTGCTTTAGTCTATTCTGCAAACACTAGTTTTGATTCTCTTCTGGAGTCACTAC TTGCTAGTGCAAAGCCTTCCCCACAGTCAGGCGGCATTGCAAAACAAGCATTGCATTCAATAGCCCAATGTGTGGCTGTTCTATGTCTTGCTGCTGGTGA TCAGAAGTGTTCATCTACAGTGAACATGCTTACCAAAATGCTCAAGGACGACAGCAGTTCTAACTCGGCTAAGCAGCACCTTGCACTTCTATGTCTTGGA GAGATTGGTAGAAGGAAGGATCTAAGTGCACATGCCCATATAGAAAATATTGTCATTGAGTCCTTCCAATCTCCATTTGAAGAGATAAAATCTGCTGCTT CTTATGCTCTTGGTAACATTGCTGTGGGCAATCTTCCTAAGTACTTGCCATTTATCTTGGACCAGATTGACAATCAGCAGAAGAAACAATACCTCTTGCT TCATTCTTTGAAAGAGGTAATTGTAAGGCAATCTGTTAATAAAGCTGAATTTCAAGAGTCTAGTGTTGAGAAAGTACTTAATTTACTCTTCAACCACTGT GAAAGTGAGGAAGAGGGGGTGCGCAATGTAGTGGCTGAGTGTCTGGGAAAAATTGCGCTTATTGAACCTGTAAAGCTTGTACCTGCACTTAAGGTACGAA CAACCAGCCCAGCTGCATTTACTCGAGCTACAGTTGTCATTGCTGTGAAGTACTCTATTGTTGAACGTCCTGAGAAGATTGATGAGATCATATATCCGGA AATATCATCATTTCTTATGCTTATCAAGGATAATGACCGACATGTTAGGCGAGCTGCTGTCTTGGCTTTAAGCACATTAGCTCACAATAAGCCAAACCTC ATCAAGGAATTTCTTCCTGATCTGTTACCTCTTCTCTATGATCAAACTGTTGTGAAGCAAGAGCTGATAAGGACAGTTGATCTTGGCCCTTTCAAGCATA TTGTGGATGATGGTCTTGAATTGAGGAAGGCTGCTTTCGAGTGTGTAGACACATTACTTGATAGTTGTCTTGATCAAGTGAATCCATCATCATTCATTGT TCCGTATCTTAAATCTGGTTTGGTTGATCATTATGATGTTAAAATGCCTTGCCATCTGATTCTCTCAAAACTTGCTGATAAGTGTCCATCAGCCGTGTTG GCAGTTTTAGATTCATTGGTGGATCCTCTATCGAAGACAATTAATTTTAAGCCTAAGCAAGATGCTGTTAAACAGGAAGTGGATCGTAACGAAGACATGA TTCGAAGTGCACTTCGAGCTATTGCATCCTTGAACCGCATTAGTGGAGGAGATTGCAGTGTCAAGTTCAAGAACCTTATGAATGAAATATCAAAATCACA AACTCTCTGGGAGAAGTATTATTCAATTCGCAATGAATGATGGATAAACAGATATGCACATTGGAGTTGAAACCCATTGATGCATATTTAAAGGAGTCTC TCTGGACCAGTTACTTGTACTATAGGAGAAATCAATTTACGCGATCTACCATGGGAATGCTAGTGATGACTTCTTGTATAGGATAAAATATTTTGCCTTG TTTGCTGTTTGCATCTATCAATTAGCCACTTTCTTTATCAATTCACCACCGCAATTGCCTAGACACAAAGCAAAGTAGGAAAAAAGAGATTAACATTCAT GGATGAAATGTACTTCGGATATTTGTCTTCAATCTTTGTCCATCCTTATAGTTATGTTGTAACAAGTTGAGCTTACTTTAGAAGTGGTTGACGACGTTAG AAGTGGATTGTGCTTTAGACAAAATTTACCTAAGGGGCTATGATTGAACTTGAAAATAAATTAAAGGTAAATAAATAACTAAAATGATGGATGATACAAT GACAATAAAACTCAAACâBLAST |
| Tissue | pods |
| Gene name | LI_gene_137902; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_432741
| Blastp | Cullin-associated NEDD8-dissociated protein 1 from Arabidopsis with 80.74% of identity |
|---|---|
| Blastx | Cullin-associated NEDD8-dissociated protein 1 from Arabidopsis with 79.43% of identity |
| Eggnog | cullin-associated and neddylation-dissociated(ENOG410XPK4) |
| Kegg | Link to kegg annotations (AT2G02560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440423.1) |
| Pfam | TATA-binding protein interacting (TIP20) (PF08623.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |