| Id Trinity | TRINITY_DN44587_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_432823 |
| Sequence | CACAAAGATTGTTGAATTCTAACTTCTTTACCTTTCAATTTCAACCTTCCAAGGTTGCACGATTCAAGTTTCAAGATCACAAACATGACCGCGAACAAGA GAGCTCATCACAAAGAGAAACCAGTTCGCCGCAAGGAAGAGAAACCGGAAGAACCGGAAGAGCCGAAATACAGGGATCGAGCTAAGGAGCGTAGAGAGGA TCAAAATCCTGATTATGAACAAACTGAACTTGGATTTCATGCAGTTGCTCCTCCTGGTAATGTAGATCTAAGGTCATCTGATGCACAGAAATTGTCTATT GAGAAGAGCAAGTACCTAGGAGGTGATGTGGAGCATACACATTTGGTCAAAGGTTTGGATTATGCTTTACTGAACAAAGTAAGAAGTGAGATTGTCAAGA AGCCAGAAGCGGGGGATGATGTTGATGGCAAGTCCAGAGCATCTAAGGAAGACCAGCAAGTGTCAATTCGCACAGCAACCGCAAAGTCAGTTTATCAGTG GATTGTCAAGCCTCATACAATTATCAAGACAAATGAGATGTTCCTCCCTGGGCGAATGACGTTTATTTATAATATGGTGAGAATTTCTGTTTGGTTAATA AGGTTCTGGTGTTTATAGGAATGGCATGGCTGATTTATTTTTTATTTTTTTTATCATTCTTACTTTGCAATTAGCTTGTTTTAAACTCATTTTATTTGTG CTTTTATTTACTTATGCTCACACTATTACAGAATCAGTGTGGTGAACAACATACATGTGTCTATACCTGTGTTTTAAGAAACACAAGCATCTGGCAGTCT TCAATCTACAGATTCCCTGAAACACAATAACCATCAAGTTATGTGAGATCATTAAAATGATCATGTAATGATCATAAGACTTCTAAAGCACATGACTTAT GTTTTAATCTGGACTGATCTTGCAAATCTAATGGTCAGGATATGTGTGGGTCTCTGTATCTGTGTGAAGCCACCTTTTTTTATCTTGTTCAAGAATGTTG GCAACACATAATCTCTCTGCCTGCCTATGTTTTGCTAGTATGTTGGTTATATGATTTAGAATCATCATCATGAACATTAGTCAATGCAATTGATTTTGAA TATTCATAAAGTATGTAATACCTGAACATTATAATACTTGAAGTAATGAAGGGAAAAGTCAACATAGTTCTTTGATTCACCTTATAGAATTGATATACTA ACAGTAGGGTGGTTATTTTGGCAATTCCATCTTTACAATTCATGTCTATGGCTCTATGGACTGGTTGATCCAACCCTTTTATATGGTTTTTGAAGCAAGC TTCTGACATAAATTCACATTTTTAATCTGTTAGGAGGGTGGATATCATCATGATATTCCTACGACCTTGCACCGTAGTAAAGCTGATTGTCCAGTGCCAG AGGTTTATGATCTTGCTGATTCCCTTTTGTCACCTGTTCATTTTACATTGGACAGCATTGCCTAAAATAGGTTGCTCTTATTTTGCACAGGAAATGGTTA CTGTTAATGTTGATGGATCTGTACTTGACCGAATTGCCAAAATTATGTCATATCTTCGTCTTGGTTCTTCTGGGAAGATTCTAAAGAAGAAAAAGAAGGA AAAAGATGCTAAAGGGAAGATTTTGGCATTTAGTGATGGATATGACAAAGAAGATAAGCCATCTAAGGCTGAAGGTGGAGGGTTAAAGAATCAAACTGAA AGAGAACCCATCCTACCACCTCCACCTCCACTCCCCTCGAAGAAAAATCATCCTAATTCGAGAGAGAATCAAGGCCCAGCTGTTGCTAGAGCAGAAGATG ATGACATTTTTGTAGGTGAAGGTGTTGACTATGATATTCCAGGGAAAGATTTAAGCCAAAGTCCTCTCTCTGAGGACATGGAAGAGTCTCCTAGGAACAA GGAAAAGCCTTCATATTTCACTGAACCAACTTATGGTCCTATCCCGCCCTCTATGCTGCCTCAAGAATGGCATGAAACGAATGGATACGATATAATGCAA ACACAAGCCTTGGCTGCTGGCTACCAAGGAGAGTGGCAGGAATACCAGTATGCTGAACAACTGGCCTACCCTGATCAATATCTTCAGCCAGATATGCAGG CTTATGATTTGCAAGCTGGTATAAATATGCCACAAGATCCACGCTTTATGACTCAAGAAGAGAAGGATCGAGGCTTGGGATCAGTGTTTAAGCGAGATGA CCAGAGACTTCAACAGCTGAGGGAGAAAGATGCTCGTGAAAAAGATCCCAACTTTATCTCGGAGAGTTACTCCGAATGTTATCCAGGGTATCAAGAATAT AATCGTGAGGTAGTGGACAGTGATGATGAAGCTGACTTGTCCAAAATGGATATGGGTGGAAGGGCGAAGGGTCGTCTTCATAGATGGGACTTTGAAACTG AAGAGGAATGGGCCACTTACAATGAGCAGAAGGAAGCAATGCCAAAGGCGGCATTCCAATTTGGTGTGAAGATGCAAGATGGCCGGAAGACTCGAAAGCA AAACAAGGACCAGAAACTAAACAATGATTTGCACAAGATCAATAAGATACTTGCCAGAAAGAAGATGGACAAGGATACTGATGATGATACTGGCCACCAT TATGAAGACGAAACACCTGGAAAGAAGCTCCGGATATGAGTCTCCACCATCAGTCATCGCGTAGTAATATCAATAGAACTAGATGAGAATTCCATTCACA TCTGAAGATGATGTATGAAAATGGTCTGTTTTTTAACTTAGAAATCCCATTCAGGTTGTTTTCTCATGTTCATAGAATGAAAGATAAATGAATTGTGATC AGTAGACTGTGTAAGAGGATTGTTAAATCTGATCATAAACCAATGTTTTCAAGACCTATATGCTTCAACATTTGTAGGTCCAAATCTATCCCTTTTATGA ATAAAAAAGTATAACATATTTAGTGATAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_137955; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_432823
| Blastp | Suppressor of mec-8 and unc-52 protein homolog 2 from Arabidopsis with 69.19% of identity |
|---|---|
| Blastx | Suppressor of mec-8 and unc-52 protein homolog 2 from Arabidopsis with 60.78% of identity |
| Eggnog | IK cytokine, down-regulator of HLA II(ENOG410YR3Z) |
| Kegg | Link to kegg annotations (AT2G26460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417445.1) |
| Pfam | RED-like protein N-terminal region (PF07808.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |