Ll_transcript_432816

• Id Trinity: TRINITY_DN44588_c0_g1_i5
• Name Transcript: Ll_transcript_432816
• Sequence: AAATTGATTAATCCCCTATCCCAACGTTAACAAGAAACGAGTCCATCATCTGCTTTCACTCTTCACACCGTAGCTTTTTGATGGCTAACCGCGTTTTCTC CGCCGCAACCAAACGTATCACTTTCATATTCGGCGCACGATGCCATTGGAGCTCCGTCGCTTCTACATCAGAGGAGTCATTCCCGCACAGATTGAAGAAC CGAATCTTAGGACTCAAATCCTCTACAAGAAGTGCATTTCCCGCGCTTCAGAATTGGGTGGACCAAGGCAACAATCTTTCACACTTCCAACTTAGACGCA TTTCCAGGATACTCCTCAAATCGAAGCGTCATCATCACGCACTTGAGGTACTAAAATGGATGGAAAACCAGAAGAATTTTCATCTAATCCCAGCTGATCA TGCTATGAAATTGGAAATAATCATTAAAACGTATGGTCTATTGGAAGCTGAAGAGTACTTTATGAGTATATCTGATTCAGCTTCGAAGAAAGCTGCCTGT CTCCCCCTCCTACGTGGTTATGTAAGAGATAGGGACACTAGTAAAGCTGAGACTTTCATGGTAAAGCTCTATGATCTGGGGCTAATGGTGAGCCCTCACC CTTATAATGAGATGATGAAACTGTATTTGGCCACATGTGAGTACAGTAAGGTACCCCTTGTTATTCAGCAAATGAAGCGAAATAGGGTACCATGCAATGT TTTGTCCTACAATCTTTGGATGAATGCTTGCGGTGAGGGAGAAAGATATGGTGTTGCAGCTGTAGAGAGGATTTTTAGAGTAATGCAAAATGATGAGAAT ATTGAATTGGGTTGGAGCAGTCTTGCTACTTTAGCCAATGTCTATATTAAAGCAGGACAATCTGACAAAGCCATTCAGGTTCTCAGATATGCAGAAAAGA AACTATCTACCTGTAACCCTCTTGGTTATTTCTTTCTCATAACACTATATGCCTCTTTGAAGGAAAAGGAGGGAGTATTGCGGCTATGGGAAGCTAGTAA GGCAGTTGGTGGAAAAATCAGTTGTGCTAACTACATTAGCATACTAACATGCATGGTGAAGCTTGGGGACATTGTACAAGCCAAGAGAATCTTCAGAGAA TGGGAGTCTAATTGTCAGAAATATGATATCAGAGTCTCTAATGTTCTTTTGGGTGCATATGTACGGAATGGATTAATACAAGAAGCTGAAGCATTACATG TCCATACATTGGAGAGGGGTGGTTGTCCAAACTATAAGACATGGGAGATTCTCATCGAAGGATATGTTAAAAACCAAAAAATGGACGAGGCTATTATTGC CATGAAGAGAGCTTTGGCTTTGTTAAAGGATTGTGATTGGAGGCCACCACAAGGACTTGTATTAGCCATTGCAGAGTATTTGGAGAAACAAGGAAATTTT GACTATGCAAACGAGTATGCTACAGAAGTCCACAATTTTGGTCTTGCAAATTTACCATTGTATAAAATATTGCTTAGAATGCACATTTCTGCTAACAAAC CACCTTTCCATATCCTTAAAATGATGGACAAAGATAAAGTTGAGATGGATGATGAGACTCTTTCCATTCTTAACGCCTTCACTGGGTAGGTAACATCAAA CCCTCTATGTTTTCCTGATTGCTTGTTCTTGCAAGATGAGCAGTTGCTCCCGTCCTCCTGAGAGTAGTTCGTGGTGTGCATGTGTTCAGGAGGAATTGTT TGGAGGTGAAGCAGTAACTTGGAGTCACTTTCATTTATGGGAATATGAGAAAGAGGATGGCCACCAACCAATTGAAGGGGAACAAACTGCAGTTGAGAAG AAACTTCCTTCCCCATACTCATTGCCTTTTGACTTTACTCTTTATGTTCCCTTCTCATTTTTGTATTCTATAAATATGTGTTCATAAACCTGTTAAGTGG GGCAAATGACTATACTGTTATGTTATTAATTTGTTCAAAAGCATTGAGTTTTCAATTGATCTACTATTACTCCTGACTAACAAAGAAAGCTTATAGAAAG TTTAGAAATCGTGATTTGGGGTTGCCAGAG
• Tissue: pods
• Gene name: LI_gene_137956;
• Additional information: details;

Expression of Ll_transcript_432816

FPKM

• PAB: 0.5
• PNAB: 0.6
• PS1: 1.4
• PS2: 0.1
• PS3: 1.5
• PW1: 0.4
• PW2: 1.4
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_432816

• Blastp: Pentatricopeptide repeat-containing protein At5g27460 from Arabidopsis with 52.23% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g27460 from Arabidopsis with 52.38% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G27460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415822.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;