Id Trinity | TRINITY_DN44596_c0_g1_i2 |
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Name Transcript | Ll_transcript_432467 |
Sequence | CGCTTCTCAATAAACTAAACCATGGCGTCGATACCTCTCACGACGTCGTTTCCCCTTCTCCGATTACACTCCTCCTCTAACCTCACTCCAACTTCATCAC TTCGCTATTCCATTCCCGCCATTTCCAAACGCACAAAACGATGTCGTTTCAGTCCATCACCAATACTCTCCACTTCACATTACAATCTCAGTAACACCAA ACTTAACCGAACATTCTCCACCGTCAAAGCCTCCGCCGCCGGAGCTTCCGTAACGCCGTCACAATCTCCGTCGCCATCTCCACCGTGGCAAGGTGCCGCG ATAAAACCTCTGCTAGCTTCAATAGCAACAGGTGTTATACTATGGTTCGTTCCTGTTCCCGATGGTGTGACACGGAACGCGTGGCAGTTACTTGCGATTT TCTTAGGTACGATCGTTGGAATTATCACGCAGCCATTGCCGTTAGGTGCGGTGGCTATACTAGGTCTTGGAGTTTCGGTTCTCACAAAAACGCTAACCTT CGCTGCGGCGTTTTCGGGATTCAGTGATCCGATCCCGTGGCTAATCGCGCTTGCGTTTTTCTTCGCGAAAGGATTCATCAAAACCGGTCTCGGTAACCGT GTTGCGTATCAATTCGTTTCACTTTTCGGTAGCTCGTCTTTAGGGTTAGGTTACAGTTTGGTTTTCAGCGAGGCGCTTTTGGCGCCGGCGATTCCGTCTG TTTCGGCGAGAGCCGGGGGGATTTTTCTCCCGTTGGTGAAGTCTCTGTGCGTTGCGTGTGGTAGCAACGTCGGAGATGGAACGGAGCATCGATTAGGGTC GTGGTTGATGTTGACTTGCTTTCAAACTTCGGTGATTTCGTCGGCAATGTTTCTGACGGCCATGGCGGCGAATCCTCTTTGCGCCACTCTGACTCTGAAC TCGATTAATCAGACGATTGGTTGGTTGGATTGGGCGAAAGCGGCGATCGTGCCGGGTTTGTTGTCGTTGGTGTTGGTGCCGTTAATATTGTATGTGATTT ACCCGCCAACTTTGAAATCAAGTCCTGATGCGCCTAAACTTGCTAGGGAGAAGTTGCAGAAAATGGGGCCTATGACTAAAAATGAGAAGATTATGACTGC AACCTTGTTTCTTACGGTGGGTCTTTGGGTTTTTGGAGGGTTTCTTAATATAGATGCTGTAACTTCTGCAATTCTTGGATTAGCTGTACTCCTTGTTACT GGGGTTGTAACATGGAAGGAGTGCTTAGGTGAGGGAGTTGCCTGGGATACTCTCACGTGGTTTGCTGCTCTCATTGCAATGGCTGGGTATTTGAACAAAT ATGGTCTTATTTCTTGGTTCAGCCAAACTGTAGTCAAGGTATAACTTCTGCTTCTCCCTATTATTTATCTTCAGTTCGTTTTTGATAATGCCTGATTGCC CATTTTTCCTTTTAATTTAACTCCGGAAGTTTATTTTTATATGCAACCGTTCTAGTTTTTTCACCAAATCAACCAAACACGGGAGCCTTTTTCACCTTTT CAATCATGCGAAAGCTAAAGTAACTTACAGCCAAGTCAAATGTACATGAGTACTTGACACACTCATCTCTATTATAAGACGGTGTATTGCTTATTTGCTT GTTAGTGTATTCTCTTGGAATAAAATCATCATGCATCTTATTTCATTTAGATGCTTTGTTTGTTCCTGGACTTCCTGCTTCTTTCTCAATTATCAAATCA TATGCTAAAGTCAAGTCTTTTATCTTTGTTCCATCACTTCTATGTGTCTGTGGATATGTTTTATGTTTATTTGTTTTTATCAATTGAAACTCCAACTTCT TCGAAGCTTTTGAGGAACAACAATGGTTTATCACATTGGATCATAATGTACTCAAGGTTCCTCCGAATGCAGTTAATTATGAACAACAGCTAAAGAAACT TCTTTCAAGAATATATAATAGCTTGCATTGCATGGCAATTTATTTATTACATTCCTTCCACATTATGGTCGTTTACTATCATAGTGCTCCACAAAAGAGA ATATGCAACACAATTGCGTGTCATAAAATTTATTTTGCTTAAAGAAACTGTCTAAGTAATTTATCATACTCCTTAATTGTTTTATATGAAAAGGATTTGC TAATGGTATTGTTTGACTACAGTTTGTTGGCGGATTAGGTCTCTCATGGCAACTATCATTCGGTATTCTAGTCCTTCTCTATTTCTACTCACATTACTTC TTCGCAAGCGGAGCTGCTCATATTGGTGCCATGTTTACTGCCTTCTTGTCTGTTGCTTCTGCTCTGGGCACTCCACCATTTTTCGGCGCTATCGTGCTAT CCTTCCTCTCCAACCTCATGGGTGGCCTTACCCATTATGGGATTGGCTCAGCTCCTGTATTTTATGGTGCCAACTATGTGCCCCTTGCTAAATGGTGGGG CTATGGATTCATTATAAGTATTGTTAACATTGTTATCTGGCTTGGAGTTGGAGGAATTTGGTGGAAGGCCATTGGCTTGTGGTAAAGGGTTGCTAAAGAA CTTTGCCAACCCAAATTTCCAAATTGAAGATTTTTGTATAAGCCCTAGTTTCAATATCTCTCTGTTACTATTAGCATTTGATGCAATCTTCTAACCTTTA AGTTTCTTGAGTTAATAAGATTACAGGAGATGTTGAAGGAGATTTTACGTTGGGAACTAAAACACAATCTGTTATTTTAGATCCCAACTCCCGAGTGTAA AATTACATGTTTTTGTACCAAAACAATAAAAATTAGAGTAATTATTTATGAGATGTAAATCATTAAATGACTTGATATTCTAGAAATTTAAAATTTGTTG AATTTGTTTGTGAATGGTCAATTGACCAATTTTGCATTTTATAGATGAGTCAGAGTGAGAACTGTTATCAAAGTGAAGTAAATTAATATTATGACAATTT TATTCTGTTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_137970; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_432467
Blastp | Dicarboxylate transporter 1, chloroplastic from Arabidopsis with 76.58% of identity |
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Blastx | Dicarboxylate transporter 1, chloroplastic from Arabidopsis with 88.6% of identity |
Eggnog | Transporter(COG0471) |
Kegg | Link to kegg annotations (AT5G12860) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448317.1) |
Pfam | Sodium:sulfate symporter transmembrane region (PF00939.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |