Ll_transcript_283357

• Id Trinity: TRINITY_DN44647_c0_g1_i4
• Name Transcript: Ll_transcript_283357
• Sequence: CTGAAATTGAATTTTTTTTGCGGAATTCAGAAACAACTTTTTCTCCTGGACTCAGCAGCATAAAGCGCCTCTTCATGAGTGTTTGATAAATCAAATTCAG ATTTAGGCGAAGAAATATGGGCGCAGAAGCACAAATCTGCAGAAGCTTAATCAACAGAATCTACGCTCCATTAGCCAATGAATTTCACTTCGCTATGCCT CTCTCCTCCTTCAGAACAAATGAACTCGAACTCGTGCGAGGCGTTCTACGAATGTTGCAAGGGTTTTCTGGTTCCTTGTTCTGTTGGGATCATAGTGCAA ACACATTTCGGTGCAAGAGTGGAGTATACGTGAATCATTTGTCACTGAAAAGTCTCCACTCGCTTCTCAATCATTTCATCCATGCAGCAACGTGTCTCCA ATTGGTAGAGATCATTGTCAAAAAAGTTGAGACTATTGGTTCAAAACCTCCTCCTCCTACTTTGATGGCTTTTGTGTGCTCTGCTTCGGCGTGGCTTAAG CGGTTACGGAATATTGCCTTGAAGGAGGAAATGTCCTTGAGCAATGTAGATGGCATGACCACTCCAACCTTGCTAGGATTGGAAAATTCTTTATCGAGTC TTTGCTCAGGTGCCGAGTTCCTATTGCGAATAGTCTATGAGGCCATCCCTATGGTATATTTTGAGTTTGGTGTATCTGTACCAGCAGCAGAACTAGCTAT TCATGTGCTTGACTATCTTCATGAGAAGCTTGATGAAATGTGTCTTGTACAAGGTGGTGAGGAGGAAGCTTATCAGATGGTTCTTTTTATGTACGTTGGG AGCTTATTGCCATATATTGAGGGTCTTGATTCTTGGCTTTTTGAAGGAACACTTGATGATCCTTCTGATGAGATGTTCTTTTTTGCTAATAAAGAAGTCA CAGTTGCTGAGGCTGAGTTTTGGGAGAAGAGTTATTTATTAAGAATGCTACAACATAGTAAGTTAGATGCTGAGTTCTCTTCCACTAATTATGTCGGAGA TTCTGTGCCAGCATCAAATGGCAAGAAGGAAGTGCACAGGAGGGGTTCAGTCTCTTTGTCTGGTACAATTAAAGGAAAAGAGCAGGGCATTGGTGACCAT CCAGCTTGTCCATTTTTTATTAAGGATTTAGCCAAGTCAATAGTTTCTGCTGGAAAATCTTTGCAGTTGATGCGCCATGTTCGTAATTCCATGGCAGTAT GTAGCAAAGAAAGTGATTGTGAGATTGGAAGTACCAAATATTTTAGTTATGGGCAGAGGATGGCTGGGCTAACCTTGTCAGAAGTTTTTTCTTTATCGCT AGCTGGACTTATAGGTCATGGTGACCATGTTTGTAAATACTTCTGTCAAGATGATTGGTTCGAATCTGTATCTGTTTCTTCCTTTACATCTTATGGAAAT GAGGAAAAAATAGATAACGTTAATATTGGAAATTTAACTGCTCTGCCATACTCAGAGAAGATTTGGTTTAAGTTCTTGATTGATACGTTATCCGAGAAGA GATCAGCTGATTTGAAGCTAAAATATGAAGACATAAATAACACCACAAGAGATCAGAGAGGGGTTCGAGTTGTTGACGACGAATTACTTCTCTTGAGATC GCACATAGAAAATCCGGTTATTACAGTGTGTCGAAAAAACCTTGGAAAGAATGGGGATGCGTTTAAAACATTGAATTTATCTGACAAGTTCTGTCTGCCT TCTTTGAACGATGAGGTTTTGAGAAAGGCAATATTTGGTGGAGACAGTTCAGCATTTTCTGATAGTAAAGGAACAAACTATGCTTTCGGTTTTCGGTTTG GTGAATCTGAATACCGTCACTCACAGGATGAAAGAAAACTGTTAGAAATGTTGTTTCCTTTTCCCACCCTTCTGCCTTCGCTTCAGGACGATCTTCCAGT GTCAGAGTATTTGCCTTTCCAGAGAAACAGCACTCTTCCTTCAAAAGTTCTTCGTTGGATGCAAAATGTTGACCTAAGAACTACTCCACTTCCTCTGGTT ATTATGCAGTACTGTCTAACCATCTACATTCAGAAACAGGTGGATTATATTGGAAGGAATATGCTATTAAAGTTGATGAATGAATGGAGGTTGATGGATG AGCTTGCGGTGCTGCGTGCCATATACTTGCTTGGTTCAGGTGATTTGCTACAACACTTTTTGACTGTAATTTTCAATAAGCTGGATAGGGGTGAAGCATG GGATGATGATTTTGAATTAAACACAATATTACAGGAATCAATCAGAAACTCTGCTGATTGTATGTTGTTAAGTGCTCCAGAGTCTTTGGTAGTGTCAACA ACCAAAAATGTCGTTGACAGTGATGAGCAAGCTATCACAGCTGGTGTTGTGTTGAGTACCCCTCATAAAAGTCATGTCAATAGCTTTGGAATTGATGGCC TTGATTTGTTGAAATTCACATATAAGGTCCCTTGGCCTCTTGAACTCATTGCTAATACGGAGGCAATTAAGAAGTATAACCAGGTTATGTGGTTCTTGTT GAAGGTCAAGCGTGCAAAATTTGCATTAGATAAAGTGCGGAGATGGATGTGGAAGGGTAGGGGATCTGCATCAAACAACAGAAAACATCATTGGTTAGTG GAGCAGAAACTCCTTCATTTTGTTGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCATGGCTTGAAATGTGTGAAAGTATGACAACAG CCAAATCTCTTGATGAAGTCATTGAAGTCCATGACGCTTACATATTATCAATTCAGCGACAGTGTTTTGTAGTTCCTGATAAGCTGGGGGCTCTGATTGC CAGCCGCATTAACAGCATCCTTGCCTTAGCTTTAGACTTTTATAACATACAACAAACATTTAGTAGTGGTGGAGCTGTTTCTGCAATCACCGCCAGATGT GAGATGGAAGTGGACCGGATAGAGAAACAGTTTGATGATTGCATCGCTTTCCTACTGAGGGTCTTATCTTTCAAACTAAATGTGGGGCACTTCCCTCATT TGGCTGATTTGGTCACCAGAATCAACTACAACTATTTCTACATGTCTGCTAATGGAAATTTGAGGACTGCCTCCAGCTCTGGAAGTGTCACTTCAAGATT AGCCAAGACCTCTGCTTAAATTGTTTGATCTAAAGAGGATGATCATGACATATATCTGAAAAATATGAGAATAGTTTTTCACCTTCTTTTATGTTGTATA GTTTTCTGAGAGAGAACATCCTCTATCTGCTTCGTTTTTAGCTTACTTTCTGTTTGAATTGGGGAAGAATACGGAAAAGGAGAAATTTGAAAGGAAGAAC CTGGTAGAAAGAAAGTAGTAAAAAAGTGAATATTGAAGACTGTTTCTGTTTGGCATGAAATAATTCAAAGGGAAAGAAAATGACTACTTTTAACTGCCAA TTATGCCCCCGTGATGAGTTGTGGATGGAGGCAAGGACCACAGAATTACAATAATATATAGTTTGTATCGTCCATTTAATCAAAGCCAAAAGTCCCATTT GTCTACATCTTGTCTTATGATGTCTACACGATTTGTATACTTTGGCACATTGAAAGCCCCAAAGACAAATTGTTTATCCACTCTCGCAGTAAAACAAGGT TCGAGTATCTCC
• Tissue: pods
• Gene name: LI_gene_138070;
• Additional information: details;

Expression of Ll_transcript_283357

FPKM

• PAB: 1.6
• PNAB: 6.4
• PS1: 9
• PS2: 6.7
• PS3: 7.2
• PW1: 5
• PW2: 4.7
• PW3: 5.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_283357

• Blastp: Gamma-tubulin complex component 5 from Mus with 28.93% of identity
• Blastx: Gamma-tubulin complex component 5 from Mus with 28.93% of identity
• Eggnog: Tubulin, gamma complex associated protein 5(ENOG410ZYW9)
• Kegg: Link to kegg annotations (233276)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416744.1)
• Pfam: Spc97 / Spc98 family (PF04130.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;