Ll_transcript_283358

• Id Trinity: TRINITY_DN44647_c0_g1_i5
• Name Transcript: Ll_transcript_283358
• Sequence: CTGAAATTGAATTTTTTTTGCGGAATTCAGAAACAACTTTTTCTCCTGGACTCAGCAGCATAAAGCGCCTCTTCATGAGTGTTTGATAAATCAAATTCAG ATTTAGGCGAAGAAATATGGGCGCAGAAGCACAAATCTGCAGAAGCTTAATCAACAGAATCTACGCTCCATTAGCCAATGAATTTCACTTCGCTATGCCT CTCTCCTCCTTCAGAACAAATGAACTCGAACTCGTACATTCCACTCTCTCAATTAACTTCATTCCAGTAACCGTTTTTATTTATTTCCACATTAGAATCT TACACTCTTGTTGTTTTTATTCTGCTTGCTATTTTTATTCTACATCTACATGTTAATTTGATATAAGGTGCGAGGCGTTCTACGAATGTTGCAAGGGTTT TCTGGTTCCTTGTTCTGTTGGGATCATAGTGCAAACACATTTCGGTGCAAGAGTGGAGTATACGTGAATCATTTGTCACTGAAAAGTCTCCACTCGCTTC TCAATCATTTCATCCATGCAGCAACGTGTCTCCAATTGGTAGAGATCATTGTCAAAAAAGTTGAGACTATTGGTTCAAAACCTCCTCCTCCTACTTTGAT GGCTTTTGTGTGCTCTGCTTCGGCGTGGCTTAAGCGGTTACGGAATATTGCCTTGAAGGAGGAAATGTCCTTGAGCAATGTAGATGGCATGACCACTCCA ACCTTGCTAGGATTGGAAAATTCTTTATCGAGTCTTTGCTCAGGTGCCGAGTTCCTATTGCGAATAGTCTATGAGGCCATCCCTATGGTATATTTTGAGT TTGGTGTATCTGTACCAGCAGCAGAACTAGCTATTCATGTGCTTGACTATCTTCATGAGAAGCTTGATGAAATGTGTCTTGTACAAGGTGGTGAGGAGGA AGCTTATCAGATGGTTCTTTTTATGTACGTTGGGAGCTTATTGCCATATATTGAGGGTCTTGATTCTTGGCTTTTTGAAGGAACACTTGATGATCCTTCT GATGAGATGTTCTTTTTTGCTAATAAAGAAGTCACAGTTGCTGAGGCTGAGTTTTGGGAGAAGAGTTATTTATTAAGAATGCTACAACATAGTAAGTTAG ATGCTGAGTTCTCTTCCACTAATTATGTCGGAGATTCTGTGCCAGCATCAAATGGCAAGAAGGAAGTGCACAGGAGGGGTTCAGTCTCTTTGTCTGGTAC AATTAAAGGAAAAGAGCAGGGCATTGGTGACCATCCAGCTTGTCCATTTTTTATTAAGGATTTAGCCAAGTCAATAGTTTCTGCTGGAAAATCTTTGCAG TTGATGCGCCATGTTCGTAATTCCATGGCAGTATGTAGCAAAGAAAGTGATTGTGAGATTGGAAGTACCAAATATTTTAGTTATGGGCAGAGGATGGCTG GGCTAACCTTGTCAGAAGTTTTTTCTTTATCGCTAGCTGGACTTATAGGTCATGGTGACCATGTTTGTAAATACTTCTGTCAAGATGATTGGTTCGAATC TGTATCTGTTTCTTCCTTTACATCTTATGGAAATGAGGAAAAAATAGATAACGTTAATATTGGAAATTTAACTGCTCTGCCATACTCAGAGAAGATTTGG TTTAAGTTCTTGATTGATACGTTATCCGAGAAGAGATCAGCTGATTTGAAGCTAAAATATGAAGACATAAATAACACCACAAGAGATCAGAGAGGGGTTC GAGTTGTTGACGACGAATTACTTCTCTTGAGATCGCACATAGAAAATCCGGTTATTACAGTGTGTCGAAAAAACCTTGGAAAGAATGGGGATGCGTTTAA AACATTGAATTTATCTGACAAGTTCTGTCTGCCTTCTTTGAACGATGAGGTTTTGAGAAAGGCAATATTTGGTGGAGACAGTTCAGCATTTTCTGATAGT AAAGGAACAAACTATGCTTTCGGTTTTCGGTTTGGTGAATCTGAATACCGTCACTCACAGGATGAAAGAAAACTGTTAGAAATGTTGTTTCCTTTTCCCA CCCTTCTGCCTTCGCTTCAGGACGATCTTCCAGTGTCAGAGTATTTGCCTTTCCAGAGAAACAGCACTCTTCCTTCAAAAGTTCTTCGTTGGATGCAAAA TGTTGACCTAAGAACTACTCCACTTCCTCTGGTTATTATGCAGTACTGTCTAACCATCTACATTCAGAAACAGGTGGATTATATTGGAAGGAATATGCTA TTAAAGTTGATGAATGAATGGAGGTTGATGGATGAGCTTGCGGTGCTGCGTGCCATATACTTGCTTGGTTCAGGTGATTTGCTACAACACTTTTTGACTG TAATTTTCAATAAGCTGGATAGGGGTGAAGCATGGGATGATGATTTTGAATTAAACACAATATTACAGGAATCAATCAGAAACTCTGCTGATTGTATGTT GTTAAGTGCTCCAGAGTCTTTGGTAGTGTCAACAACCAAAAATGTCGTTGACAGTGATGAGCAAGCTATCACAGCTGGTGTTGTGTTGAGTACCCCTCAT AAAAGTCATGTCAATAGCTTTGGAATTGATGGCCTTGATTTGTTGAAATTCACATATAAGGTCCCTTGGCCTCTTGAACTCATTGCTAATACGGAGGCAA TTAAGAAGTATAACCAGGTTATGTGGTTCTTGTTGAAGGTCAAGCGTGCAAAATTTGCATTAGATAAAGTGCGGAGATGGATGTGGAAGGGTAGGGGATC TGCATCAAACAACAGAAAACATCATTGGTTAGTGGAGCAGAAACTCCTTCATTTTGTTGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGT GCATGGCTTGAAATGTGTGAAAGTATGACAACAGCCAAATCTCTTGATGAAGTCATTGAAGTCCATGACGCTTACATATTATCAATTCAGCGACAGTGTT TTGTAGTTCCTGATAAGCTGGGGGCTCTGATTGCCAGCCGCATTAACAGCATCCTTGCCTTAGCTTTAGACTTTTATAACATACAACAAACATTTAGTAG TGGTGGAGCTGTTTCTGCAATCACCGCCAGATGTGAGATGGAAGTGGACCGGATAGAGAAACAGTTTGATGATTGCATCGCTTTCCTACTGAGGGTCTTA TCTTTCAAACTAAATGTGGGGCACTTCCCTCATTTGGCTGATTTGGTCACCAGAATCAACTACAACTATTTCTACATGTCTGCTAATGGAAATTTGAGGA CTGCCTCCAGCTCTGGAAGTGTCACTTCAAGATTAGCCAAGACCTCTGCTTAAATTGTTTGATCTAAAGAGGATGATCATGACATATATCTGAAAAATAT GAGAATAGTTTTTCACCTTCTTTTATGTTGTATAGTTTTCTGAGAGAGAACATCCTCTATCTGCTTCGTTTTTAGCTTACTTTCTGTTTGAATTGGGGAA GAATACGGAAAAGGAGAAATTTGAAAGGAAGAACCTGGTAGAAAGAAAGTAGTAAAAAAGTGAATATTGAAGACTGTTTCTGTTTGGCATGAAATAATTC AAAGGGAAAGAAAATGACTACTTTTAACTGCCAATTATGCCCCCGTGATGAGTTGTGGATGGAGGCAAGGACCACAGAATTACAATAATATATAGTTTGT ATCGTCCATTTAATCAAAGCCAAAAGTCCCATTTGTCTACATCTTGTCTTATGATGTCTACACGATTTGTATACTTTGGCACATTGAAAGCCCCAAAGAC AAATTGTTTATCCACTCTCGCAGTAAAACAAGGTTCGAGTATCTCC
• Tissue: pods
• Gene name: LI_gene_138070;
• Additional information: details;

Expression of Ll_transcript_283358

FPKM

• PAB: 0.1
• PNAB: 0.7
• PS1: 0.1
• PS2: 0.1
• PS3: 0.4
• PW1: 0.4
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_283358

• Blastp: Gamma-tubulin complex component 5 from Mus with 28.93% of identity
• Blastx: Gamma-tubulin complex component 5 from Mus with 28.93% of identity
• Eggnog: Tubulin, gamma complex associated protein 5(ENOG410ZYW9)
• Kegg: Link to kegg annotations (233276)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416744.1)
• Pfam: Spc97 / Spc98 family (PF04130.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;