Ll_transcript_283774

• Id Trinity: TRINITY_DN44654_c1_g1_i2
• Name Transcript: Ll_transcript_283774
• Sequence: TAATCAGTAAACTTGATTTACTTGTGACATGTCATTTTTTATGGTAATTTTCAGGAAAATTTAGTAGGAAAATATATCTGGTACAAAAATAGGATATTAT TAGCTTAAAATAAAATCCATAGGTAGAATTGATTTACTCTTTAGCTGAAATAAGGAAAGACACAAAAAATACACTCTTGAATAGAATTTTGTCTGGAAAC TAGAAAGATGACAGCATTTGAAACTTGCACGCAAACTTCTGAGATTTAACAATCGTGTTCTGTTCACTCATTACATTTCTTCTCAATTTCTCTCTATTTA CGACAATTACCACAAATTCTCCAAAAAAACTCATTTTGATGGCATTACCACACTCTACTTTAGCAACCATAGTAACACTTTCATCACCGACAACCAAATC TTTCAACCCTCTTCCCGTTTTATCCTTCACGAAGGAACCTTTTTTCACGAAACAAACCATACCCAGAAGAAAAAAAAGAAACTTTTCCCTAACCCCTTTA CGCGTCGCTGCGCCAACAACAACAATTGAATCAGATCAATCGTACACAGAATCTGAAAGGGGCGAGATTGATGATGAATTTGATGATGAAACCTCGTCCA CCAAGTTTTCATGGAGGGATCATTGGTACCCAGTTTCGTTAATTGAAGATCTGAACCCGAATTATCCCACACAGTTTCAGCTTCTGGGTCGTGAAATTGT GCTCTGGTACGATAAATTGAACTCAAGATGGGTTGCTTTAGATGACAAATGCCCCCACCGTCTTGCCCCTTTATCTGAAGGAAGAATTGATGAAGATGGA AACTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGGTGTGGAAGCTGTGTTAAGATCCCTCAGGCTATGTCTGAAGGTCCCGAAGCTCGTGCAGTTC GGTCTCCAAGAGCATGTGCTACTAGATTCCCTACCTTGGTTTCTCAGGGCTTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCTAATGCGTC CCAACCTCCATTGTTGCCTGATGATTTTGAAAAACCAGAGTTTGCTACAGTGAACATTCAGCGTGATCTGTTCTATGGCTATGACACTCTCATGGAGAAT GTCTCTGACCCTTCTCACATTGATTTTGCTCATCACAAGGTTCAAATAATACTCTCCAACTGACTTCTAGATGCAGGATATTAATTTTCTATCAGTTTGA TAGTTGCTAGTATTTTATTTTGGCCCTGTTGTAAGTGAAATTTGTTGAATATAATAATGTTATGCTGATGCAATAAAAAGATTGTTGTTAGGGAGAATCT GTTGGTTAGTTCCATTTATTATATATCTTACTGAAACTGCCGCATGTTGTCGAAAACTTTGAAGTCAGAGTAATTGAGAAGCCCTTCTCATGGCCCATGG GTACAGGATATGGTAAACCTTGAATGTCAGTGTTATTTTTCTAACATTCATTTTATTCTGTTGTGATTTTTTGTAAGAAGTTAGTCAGTGTATTAGATCT TATACTTTTACCATATATATGTTTCTAATATACAATTCTTGCAACCTAGCATTGTGCTTGTTTACATCATGCATTATGGTCCTGTAGTTTAGTGTTCCTT CATCATTTTGCTAATGGAATATTAGCAGTTTATTTAGCTATTATGTATTATTAATTTTGACACTAACTAGAGTACTAGACATATGCTGTTGCTAAAGTTG GAATTATTTGGTACTGTTAGGTTGTTCAATAATTCCCACCCACTAACATTAAAATGATCCATACTCTTCAGGTTACAGGAAGGAGAGACAGAGCGAAGCC TCTGACATTCAAGATGGATTCTCGTGGTCCATGGGGCTTTGCAGGAGCTAATGATGGGAACCCAAAGATCAGTGCTAAATTTATTGCACCATGTTATTCT ATGAACAAGTAAGCCAATGGCTTTTGGCCTTTTGCTTTGGAAGTAAATGTCACATGTATCTAGGTTTTGTTTTATATGAAAATTATTCAATGTCCGCATT TAATAATGAAAGAACTTTGTATGAAATTTGTACATGTTTTTGTCTGTGTGTTTTTTCATCTTTAAGGGCAAAGTGTTGGGTATCATGCATTACATCAGAA CTCATATGTATCTTGTGTCGCATACATTCGAAATGAAAATGTAATAGTAGAGCATCAAAGCTTCCTGCATGTGGATGAATTCAGTATCACACAGTCAATT TCGATAGTTCACAGGAATCTTATATTTTTTTACTTCTGTTAATTTCATTCTTTTTCACCCCTAAAGGACCACTGGGAAAGTAATTTTGGAAATGTGTAAC TGTCTTTCTAATCAAACCGTAATATACCATCCAGTACTTAAGATGAGACATGTCTTGTTAAGTTATCTTCAGTTTCACTGTGTGACAGTGTGAGGTGCTT GAAAAGCATTCTCGGACCAGTTGTGTGATTTTATGGATAATGCTTGAATCATCAATGTCAGTTTCAGTAGGTATATTGATACTAATATCTAGTTAATTCT GTGGGTGGCATATATGACAACCACATTCAAGATGCATGTCAAATAACTACCACTTTAGGTTTGGATGCTATAGCTTTTCTTTTTCATTTGTTGCTACTGC AGCCAAATAAATTTGGCGTAATTATTATTGCAGAATCGAGATTGATACCAAGCTCCCAATAGTTGGAGACCAGAAATGGGTAATATGGATATGTTCATTC AATATCCCCATGGCACCTGGTAAGACGCGATCCATTGTCTGCAGTGCTCGAAACTTCTTCCAGTTCACAGTGCCAGGGCCTGCCTGGTGGCAAGTGGTTC CGAGATGGTATGAACATTGGACTTCAAACAAGGTATATGATGGAGATATGATTGTTCTTCAAGGTCAAGAGAAAATATTTCTAACAGCAACTAAAGAGGG TGGTGACATTAATAAGCAGTACACAAACATCACCTTCACACCAACACAAGCCGATCGCTTTGTCCTCGCATTTCGTAATTGGCTGAGACGACATGGCAAC AGCCAACCAGAATGGTTCGGGACAGTCGATCAGCAGCAGTTGCCATCAACAGTTTTATCGAAACGTCAGATGATGGATAGATTTGAACAGCACACACTAA AGTGTTCATCATGTAAAAGAGCTTATGAAGCATTCCAAACATGGCAAAAAATCCTAATTGGTGCAACAGTTTTGTTTTGTGCAACATCAGGGATCCCATC AGATATTCAGTTGCGTGTAATCTTGGCTGCACTTGCACTTGCTACTGCAGGCTTAGCTTTTGCCCTTAACCAACTTCAAAACAATTTTGTATTCATTGAT TATGTTCATGCTGATATTGATTAAACACACTTGTATTATATGTGTATATATGATCAAAGAGTTTCTGTGTATTCTACAATAGACTACTAGTTTTAACCAA TTACCTTAAATAAATCATATTTCCCTCATGCTTGGTTCTAATTTAAGAGATTAAATACATTGAATCATTGTCTGATTAGTTCAATATGGTATTCTATAAA AAAG
• Tissue: pods
• Gene name: LI_gene_138081;
• Additional information: details;

Expression of Ll_transcript_283774

FPKM

• PAB: 31.2
• PNAB: 6.5
• PS1: 14.5
• PS2: 7.2
• PS3: 11.8
• PW1: 7.7
• PW2: 13.2
• PW3: 15.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_283774

• Blastp: Pheophorbide a oxygenase, chloroplastic from Arabidopsis with 63.81% of identity
• Blastx: Pheophorbide a oxygenase, chloroplastic from Arabidopsis with 73.39% of identity
• Eggnog: rieske 2fe-2S domain-containing protein(COG4638)
• Kegg: Link to kegg annotations (AT3G44880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413798.1)
• Pfam: Rieske [2Fe-2S] domain (PF00355.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;