Id Trinity | TRINITY_DN44654_c1_g1_i8 |
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Name Transcript | Ll_transcript_283780 |
Sequence | TAATCAGTAAACTTGATTTACTTGTGACATGTCATTTTTTATGGTAATTTTCAGGAAAATTTAGTAGGAAAATATATCTGGTACAAAAATAGGATATTAT TAGCTTAAAATAAAATCCATAGGTAGAATTGATTTACTCTTTAGCTGAAATAAGGAAAGACACAAAAAATACACTCTTGAATAGAATTTTGTCTGGAAAC TAGAAAGATGACAGCATTTGAAACTTGCACGCAAACTTCTGAGATTTAACAATCGTGTTCTGTTCACTCATTACATTTCTTCTCAATTTCTCTCTATTTA CGACAATTACCACAAATTCTCCAAAAAAACTCATTTTGATGGCATTACCACACTCTACTTTAGCAACCATAGTAACACTTTCATCACCGACAACCAAATC TTTCAACCCTCTTCCCGTTTTATCCTTCACGAAGGAACCTTTTTTCACGAAACAAACCATACCCAGAAGAAAAAAAAGAAACTTTTCCCTAACCCCTTTA CGCGTCGCTGCGCCAACAACAACAATTGAATCAGATCAATCGTACACAGAATCTGAAAGGGGCGAGATTGATGATGAATTTGATGATGAAACCTCGTCCA CCAAGTTTTCATGGAGGGATCATTGGTACCCAGTTTCGTTAATTGAAGATCTGAACCCGAATTATCCCACACAGTTTCAGCTTCTGGGTCGTGAAATTGT GCTCTGGTACGATAAATTGAACTCAAGATGGGTTGCTTTAGATGACAAATGCCCCCACCGTCTTGCCCCTTTATCTGAAGGAAGAATTGATGAAGATGGA AACTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGGTGTGGAAGCTGTGTTAAGATCCCTCAGGCTATGTCTGAAGGTCCCGAAGCTCGTGCAGTTC GGTCTCCAAGAGCATGTGCTACTAGATTCCCTACCTTGGTTTCTCAGGGCTTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCTAATGCGTC CCAACCTCCATTGTAATTGTCTTAAACCAATTCTGATTAGTTTAATAAAATTATATTTATATGTTCATAAATAAGCTTTGTTTAATTGAGCCACTTAAAA TGTGTTTTTAGTTTTAGTTTTTTGTACTTTGTATAGGTTGCCTGATGATTTTGAAAAACCAGAGTTTGCTACAGTGAACATTCAGCGTGATCTGTTCTAT GGCTATGACACTCTCATGGAGAATGTCTCTGACCCTTCTCACATTGATTTTGCTCATCACAAGGTTCAAATAATACTCTCCAACTGACTTCTAGATGCAG GATATTAATTTTCTATCAGTTTGATAGTTGCTAGTATTTTATTTTGGCCCTGTTGTAAGTGAAATTTGTTGAATATAATAATGTTATGCTGATGCAATAA AAAGATTGTTGTTAGGGAGAATCTGTTGGTTAGTTCCATTTATTATATATCTTACTGAAACTGCCGCATGTTGTCGAAAACTTTGAAGTCAGAGTAATTG AGAAGCCCTTCTCATGGCCCATGGGTACAGGATATGGTAAACCTTGAATGTCAGTGTTATTTTTCTAACATTCATTTTATTCTGTTGTGATTTTTTGTAA GAAGTTAGTCAGTGTATTAGATCTTATACTTTTACCATATATATGTTTCTAATATACAATTCTTGCAACCTAGCATTGTGCTTGTTTACATCATGCATTA TGGTCCTGTAGTTTAGTGTTCCTTCATCATTTTGCTAATGGAATATTAGCAGTTTATTTAGCTATTATGTATTATTAATTTTGACACTAACTAGAGTACT AGACATATGCTGTTGCTAAAGTTGGAATTATTTGGTACTGTTAGGTTGTTCAATAATTCCCACCCACTAACATTAAAATGATCCATACTCTTCAGGTTAC AGGAAGGAGAGACAGAGCGAAGCCTCTGACATTCAAGATGGATTCTCGTGGTCCATGGGGCTTTGCAGGAGCTAATGATGGGAACCCAAAGATCAGTGCT AAATTTATTGCACCATGTTATTCTATGAACAAGTAAGCCAATGGCTTTTGGCCTTTTGCTTTGGAAGTAAATGTCACATGTATCTAGGTTTTGTTTTATA TGAAAATTATTCAATGTCCGCATTTAATAATGAAAGAACTTTGTATGAAATTTGTACATGTTTTTGTCTGTGTGTTTTTTCATCTTTAAGGGCAAAGTGT TGGGTATCATGCATTACATCAGAACTCATATGTATCTTGTGTCGCATACATTCGAAATGAAAATGTAATAGTAGAGCATCAAAGCTTCCTGCATGTGGAT GAATTCAGTATCACACAGTCAATTTCGATAGTTCACAGGAATCTTATATTTTTTTACTTCTGTTAATTTCATTCTTTTTCACCCCTAAAGGACCACTGGG AAAGTAATTTTGGAAATGTGTAACTGTCTTTCTAATCAAACCGTAATATACCATCCAGTACTTAAGATGAGACATGTCTTGTTAAGTTATCTTCAGTTTC ACTGTGTGACAGTGTGAGGTGCTTGAAAAGCATTCTCGGACCAGTTGTGTGATTTTATGGATAATGCTTGAATCATCAATGTCAGTTTCAGTAGGTATAT TGATACTAATATCTAGTTAATTCTGTGGGTGGCATATATGACAACCACATTCAAGATGCATGTCAAATAACTACCACTTTAGGTTTGGATGCTATAGCTT TTCTTTTTCATTTGTTGCTACTGCAGCCAAATAAATTTGGCGTAATTATTATTGCAGAATCGAGATTGATACCAAGCTCCCAATAGTTGGAGACCAGAAA TGGGTAATATGGATATGTTCATTCAATATCCCCATGGCACCTGGTAAGACGCGATCCATTGTCTGCAGTGCTCGAAACTTCTTCCAGTTCACAGTGCCAG GGCCTGCCTGGTGGCAAGTGGTTCCGAGATGGTATGAACATTGGACTTCAAACAAGGTATATGATGGAGATATGATTGTTCTTCAAGGTCAAGAGAAAAT ATTTCTAACAGCAACTAAAGAGGGTGGTGACATTAATAAGCAGTACACAAACATCACCTTCACACCAACACAAGCCGATCGCTTTGTCCTCGCATTTCGT AATTGGCTGAGACGACATGGCAACAGCCAACCAGAATGGTTCGGGACAGTCGATCAGCAGCAGTTGCCATCAACAGTTTTATCGAAACGTCAGATGATGG ATAGATTTGAACAGCACACACTAAAGTGTTCATCATGTAAAAGAGCTTATGAAGCATTCCAAACATGGCAAAAAATCCTAATTGGTGCAACAGTTTTGTT TTGTGCAACATCAGGGATCCCATCAGATATTCAGTTGCGTGTAATCTTGGCTGCACTTGCACTTGCTACTGCAGGCTTAGCTTTTGCCCTTAACCAACTT CAAAACAATTTTGTATTCATTGATTATGTTCATGCTGATATTGATTAAACACACTTGTATTATATGTGTATATATGATCAAAGAGTTTCTGTGTATTCTA CAATAGACTACTAGTTTTAACCAATTACCTTAAATAAATCATATTTCCCTCATGCTTGGTTCTAATTTAAGAGATTAAATACATTGAATCATTGTCTGAT TAGTTCAATATGGTATTCTATAAAAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_138081; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_283780
Blastp | Pheophorbide a oxygenase, chloroplastic from Arabidopsis with 58.48% of identity |
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Blastx | Pheophorbide a oxygenase, chloroplastic from Arabidopsis with 73.39% of identity |
Eggnog | rieske 2fe-2S domain-containing protein(COG4638) |
Kegg | Link to kegg annotations (AT3G44880) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413798.1) |
Pfam | Rieske [2Fe-2S] domain (PF00355.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |