| Id Trinity | TRINITY_DN44663_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_283752 |
| Sequence | TAATATTTGACTCAAAAAATAAGTTTATCTATGGAAATCAAATGAGTTAAATTAGTTGTAAATCTAAATTATTGGATAAGTTATCCTCTCCGATATAAGA TACTTTTATCTGAAGAAGTGAATTGAAAAATTGAGGGAAGCAAGAATAGTAAATAAATCGAAAGAGAGGAGAGAAGAATCATTCGATGGCGGCGATAAGT CTAAGGAAGGGAAACACGCGGTTGCCGGCGGAGGTTAACAGAGTACTCTACGTCCGAAACCTACCTTTCAACATCACTAGTGAAGAGATGTACGATATTT TCGGCAAATACGGTGCCATACGCCAGATCCGTATCGGTACCAACAACACACGTGGCACCGCCTTCGTCGTCTACGAGGACATCTACGACGCCAAAACCGC CGTCGATCATCTTTCCGGCTTCAACGTCGCCAACCGCTACCTCATCGTTCTCTATTACCAGCAGGCTAAGATGAGCAAGAAGTTCGATCATAAGAAGAAG GAGGATGAGATTACTCGTATGCAAGAAAAATACGGTGTCTCCACTAAAGATAAGTCATAAGTAGTACAATTCAGCAATTTCGTTGCGTTAGGGTTTCGTT AGGAAATTCAGTTTATATGTATATCCATGCTACTGTGTTATGTGTTGTTATTTGAGTATGTATGGATTTGGTTTAAGTTGTTATAGTGTTGAATTTAAGC ATAATGGTTTTACTTGACAACGAAGATTCTTCTTCAATTTTGAGTTGGTTTAGTGGATTCAGGTGGAAATTGATAATATATAAGATTGAATGGTTGTGCT TATTAGTTAATTCAATACACGGCTTAATGGTAGCGACTCATGTGCATAATAATCATTTATCCGTGAGGTAATGGGTTCGAGCCGCGAGAGGCTCTTGTTA GTGGGAACAAAATACTGCAGGGTTATTTAAGTTTGTGGGTGACACGCTCAGAGAACTCATAGGCCGGCCGGGTCTATTCTAAATTAATAAATGGATTTTT TATATATATAAAAAAAGAATCGACCGTTCGAGTATTCCAAATTGCATTAAAAAATAATAGGGCAGGGACATATAAAAAGGATAGATATGTGGTATATTTC TAGGTATATTGAATTGCGAATACAGAAATAATAGAATCATTTTAGTTAGATTCTACCAAATATGAATATCCAATATCGATGAACGAGAATAAATAAAATA GGCGGAAACATCTTTCAATATAGGAATCGGTATCGAATCCATTCAACAGTTCTGGCATAATTCTCATAATTTAACTGAAAAAAATCCTAGTGAGAATGAG ATCCCAATCTAAAAAGAGGGGGGATATGGCGAAATTGGTAGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTACCAAGTGATAACTTTC AAATTCAGAGAAACCCTGGAATTGACAATGGGCAATCCTGAGCCAAATCCCGTTTTTTCGCAAAAACAAAGAAAAGTTCAGAAAGCGAAAATAAAAAGGA TAGGTGCAGAGACTCGATGGAAGCTGTTCTAACAAACGGAGTTGACGACATTTACATTTACTTTCGCGTTGGGTTAGGAAAGGAATCCTTTCATCGAAAT TTTGTAAACGATCAAGAATAAACGTATATACATATATACGTATATTTACTGAAATATTATTTCAATTGATTAATAAAATTAATAAAGACTGAAAATCTCT ATTTATTGACGGAGTAATTGAATATTGATTGATCAAATCATTCATTCCATGATAATCTGATAGATCTTTTTAAGAGCTGATTAATCAGACCAGAATAAAG ATAGAGTCCCATTCTACATGTCACTACCGACAACAATGAAATTTAGAGTAAGAGGAAAATCCGTCGACTTTATAAATCGTGAGGGTTCAAGTCCCTCTAT CCCCAAAAGTCCGGGTTCACTCTCCAATTATTTCTCCTAAATTATCTTTTTTTTATTCGTTATGTGTCTTATTCATTCAGTCCATTCTTTGACAAATGGA TCTGAGTGGAATTTTTCTTTTTTTTTTTATCACAATCACAACACAAGTCTTTGAATATGTTTATAATATATATATTAAACATACAATTTTTTTGTTTATA TTATATGATAAACAAACCTACAAATGAACATCTTATCCTTGAGCAATGAGCAAGCAAGCCTCATATTAATGATTAGTACTACTGAAAAAAAAAAAAAATT AAATTTAAAAATACAAAAGTATTTTTTATTTAGTTGACATAGATTCATTGACATATATTCAAGTAATCTCTTAAAATGGAGATGCTGCGCCAAGAATGGT CG BLAST |
| Tissue | pods |
| Gene name | LI_gene_138103; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_283752
| Blastp | - |
|---|---|
| Blastx | Splicing factor 3B subunit 6-like protein from Arabidopsis with 87.9% of identity |
| Eggnog | premRNA branch site protein(ENOG4111IHX) |
| Kegg | Link to kegg annotations (AT5G12190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460440.1) |
| Pfam | - |
| Rfam | Intron_gpI (RF00028) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |