Ll_transcript_283540

Id TrinityTRINITY_DN44679_c0_g1_i1
Name TranscriptLl_transcript_283540
SequenceAGCAAGCCCATCTGTTTGGGAAAGGTTAATGGAAGTTACTAGTTGGAGAAGAGAAATAGGTTCTAATTTAGAGTTTAGAGAAAGAATGGAATTCGAGAAG AGAAAAGCAGCGAGCATAGCTTCACTAAGGTCAATAGAATCAGACAAATCAGCGAAAGGGTCATTAGACACACCAATTATTCCTCTCATTAATACTATTA ACCATAACCCTCTTTACTTCACCACCAGCTCCTGCTCTGGCAGAATCTCAGTCCTCTCTCAACCCCTCTCTACTCTCTCTTCCAACCCTAAGAAGAAGGC ACGTGGTGGCACGTGGCTATTCGTCTCACACCACCCCGCTGAACCGGACTCGCTCCTCTCCCTTCTATTCCCCTCCCCCGACTCAACTCGCCTTTCTGAG TCCGAACTCGTTTTCAGATTCGAGCCTCTCATTGTTGCTGTTGAGTGCAAAGACCTCGCTTCGGCTCAGTCCCTTGTTTCTTTAGCCATTTCTTGCGGTT TCAGAGAGTCTGGGATTACTAATACTAACAAGCGTTTCATTATAGCCATTCGATGTTCGATAAGGATGGAGGTACCCTTAGGTGATACTCCCAATATTAT GGTTACGCCTGAGTATGTCACTTTTCTTGTTCGACTTGCCAATCACAAAATGGAAGCTAATCGTAACAGAACTGATAGGTTCCATCAAATGTTGGTGTCG TTGTCACAATCTAATGATAACACTAATCATTTATCACCAAATCATCATGCAATAGGGATTCTACATCACCATTCTGAAGTTGAGGATGATTCTCAGCACA ACGGAGACAATTATTCAGGGTCAACTGTGGGGTTTTCTGGTTCTAGTCTTCCAATTGCCCATATCGAAATTGTTGGTGAACCAGTCGAGAAACTTTTCCT TTGGGGCCATTCAGCTTGTGCATTGAATAATGGCAAACACAAGAAAGTTGTTGCATTTGGTGGCTTTGGAGGCATGGGGAGACATGCCAGGAGAAATGAT TTGTTGCTACTGGATCCATATTCTGGCAATCTGGAAACAGTCAGCAGTTTTGGTGAAGTAGCTCCATCTCCATGCTTAGGCCATACGGCTTCCTTGGTTG GAGATCACATGTTTGTGATTGGAGGTCGGACTGGTCCTGATAAAATTTTGAATGATGTATGGGTCCTTGATACCACCAACAATTGTTGGAAGTTACTTCA ATGTGGTGGCAGTGTCTTTCCTCCCAGGCATCGTCATGCTGCAGCTGTCATGGGTTCAAACATTTACGTATTTGGGGGACTAGACAATGATACTATATTT TCCTCCCTTTATATTCTTGACACAATTAGTTTACACTGGAAAGAACTACCAGTTTCGGGGGACTGGCCATGTGCCCGCCACTCTCATGCAATGGTTGCAT CTGATTCTCACATTTTTATGTTTGGCGGATACAATGGTGAGAAAGCACTTGGAGATTTGTATTCCTTTGATGTTCAGAAGGGTCAATGGCAGAAGGAAAA GACAGCTGGAAGTAACCCGCATGCTAGGTTCTCCCACTCAATTTTTGTTTATAAAAATTATCTTGGAGTTCTTGGTGGTTGTCCAATCAGACAACATTGT CAAGAGTTGTCTTTACTTGATTTGAAGCTTCATCTATGGAAGCATATTACCCTTACTTCTATAGGTAAAGATTTATTTGTACGAAGTACAGCCATTGTTA TTGGAGATGATGTTGTTATAGTTGGTGGTGGTGCATCATGCTATGCATTTGGAACCAAGTTCAGTGAGCCAGCTAAACTCAGCTTGCTTCATTTAATGCA TTCCTCACATGATGATCTTATGCCTGTCAAAAATCCAAGAAAGCTTATGTTTGGCCAAAATGATGGGACGAACCAGAATAAGATTGAAAGTTCTTTGGGA TCCCAACTGGAACATGCGCCAAATATATCTGAAGATGAAACTTTATCTTCAAACGATGGCTTACCTTGCATGAATGATCAAAATCAGATGATTCTGCCAC ATTATATTCTGCAACTAGAAAAGAAATATGCAAAATTAGGGAAGGATATGTTGAAGAAATTTGGATGGTTAGACTTAGGGAGAAAGGTGTACTGTGAAGA GGGTGGAGTACATATCTGTTTTCCTGTAATTAAAGATTTTGTTTCTTTATTTCATGAAAGGAATCACCACTTAGAAGATGTGATTGATGGAAAAAATGGA GCCCCCTTTTCAAAACCACTTAAAGGAGATGGTAAGTCGTTACATGAGATATCCTGTTCCGAAGCATTGAGTCTACTCCATGGATATGGTGCCATTTTGC TGGAAGATGAGATTGTTGAAGTAAGAAAAACTGCAAAGTCTCCTTTGAAAGTGATGATCGAAGCGGTAACGTCTTTGATTGAGCATAAAGGTCTACCAGC ACAGCTTCTGGATGAACTGCCAACAAGGTGGGATCGACTTGGAGATATTGTTATACTTCCAGCTACTTCTTTCAAGGATTCCATGTGGGATTCTATCACT GAAGAGCTTTGGACCATTGTTGCCAAATCACTTAAGGCTCATCGTCTCGCCCGCCAAGGCCCAGTTGCTGCAACTGGTACAAGAGATAGCACATTGCAGA TTCTTGTCGGAGATAATGGCTGGGTCAACCATCGAGAAAACGGAATACTCTATTCTTTTGATTCTACGAAGTGCATGTTCTCATGGGGTAATCTTTCTGA GAAGCTGCGGATGGCCAAGCTGGATTGTAAGGATGAAGTTATAGTAGATCTGTTTGCAGGCATTGGCTACTTTGTGCTGCCTTTTCTTGTCAGGGCCCAG GCAAAACTTGTATATGCTTGTGAGTGGAATCCCCATGCTTTAGAAGCTCTCCAACATAATCTGCAAGCAAATTCTGTGGCTGATCGTTGTATCTTACTTG AAGGAGATAATCGAATTATGGCTCCCAAGAATGTGGCTGATAGAGTCTGTCTGGGTCTCATTCCATCTAGTGAGAGTAGCTGGGTCACAGCTGTGAGGGC TTTAAGGATAGAGGGTGGAATATTACATGTCCATGGGAATACAAAGGACTCTGAGGAGCCTGAATGGATTGATCATGTATCAAGTTCAATATATGAAATT GCTAAATCTGAAGGTTATTGTTGGGAGGTTTCTATAGAACATGTTGAGAGGGTGAAATGGTATGCTCCTCATATTCACATGAGAGAGATAAAAAAGAAGA AATTAATGTGAAAACAATCATTTAACTTTTCCTAAAAACGATATTGTAGTGATCGTCTAATTTCCAAAACACAACAATCTCACTACATAGATGTTAGTAG CAACTGCCGGTGGTCACAGCCACCAAGCTAGGTTAAGCACTCAGTCATCAATCTCTGAGATAAACCAAAAAGTAAAATGTACATTCC BLAST
Tissuepods
Gene nameLI_gene_138140; 
Additional informationdetails; 

Expression of Ll_transcript_283540

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_283540
BlastptRNA wybutosine-synthesizing protein 2/3/4 from Arabidopsis with 58.34% of identity
BlastxtRNA wybutosine-synthesizing protein 2/3/4 from Arabidopsis with 57.82% of identity
EggnogtRNA-yW synthesizing protein 3 homolog (S. cerevisiae)(COG1590)
KeggLink to kegg annotations (AT4G04670)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019462817.1)
PfamMethyltransferase TYW3 (PF02676.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;