| Id Trinity | TRINITY_DN44707_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_335343 |
| Sequence | AGACACTTTTGGATTCTTCTAATCATAGGCTATAACATTATTTTTTCTTTTTACGCAGCCACATGTCCATGCCGTATCATATCTGTTTTTCATGCCATAT CCTTAATACCATTTCATCCAATACCTCTATTTTTATTTGTTCTGAATTTTGAGGGGAATGAGATGGAACCATCTTATTAATTATTACTAACTTTATTCCG CTATGTTCCATCATAAAATATATGGACAATAGTTTGGTCATTTCTTTAATATTTCTTTCCATTTCAATCATCAATAAATATCCCAACATATTAGTTTATA ATCTCTGCAGTTAACTTGTTGACCTTTTATGGAATAGAAAAATTCTTAGGTAAGTCAAATTGAAAGCCGGCATGTGTTGGATAGTATTGGTCGTGTTGGA AATGTGCATGTTTTACTGATTCGTTAAGATCTCCTCTAACATGATTTGTGGTGAAAAAAGTAATTTAAGTTTCACTTGCACTTTACAGGTGATAATTTAT GCATTTCCTGTGTTAACAAGGGAGAATTGATTAATGTTGCACCAAGTAGCTGCATGATAATGTATCCTTCCTTCTCCTCTGCATAAAAAGGCTGGAGCGT TGTTATGGCGTCAAGAGTGATTTTGAAAAGGAAAAAGAGCCTCTTGAGTGCCCTTGGTCAACCAACTCACGCACGCTTTATTCTTGGATTCTCGAGTCTT GGGCATGGGCAACCATTTGAGTCTACCGGCTTAAATGGTTTGAGCCAGTTTCCCCATAATCCATCTGCAACTACTGGACATAAACCGGAAACAAATAAAT TTTCTGTCAATAAGGATGATATAGCAGCATCAAAGTTTCTCTTGCATAGTTCCTTTAGAGTTTCAACTAATCGATATAGAACTGAGAAAACAGAGTTTAT TTCACTTCAAAGATCCTGGTGGGTATCTCAATATACACGTCACATTTCCACTACTCCAGCTGATCAACCTGGACTGGGTAGTGGTAATGAGAGAAAAGAG CAATCACCTGGTAAACAGAAGAAGGAAGCTTCACCAGAGGATTGTGATGAAGCTGTTGAAGGCTTGAGTACTGTAAAAGCACAAGCTAAGGCTAAATTGC AAGAATCCCATAAGGCTGATGAACCTATTTTAAAGAGATTATGGGCCAAGATTCTAGGAATTGGTCCAGCTTTCAGAGCTATTTTGTCAATGAGCAGGGA TGATTGGGCAAAGAAGTTTTCTCATTGGGGGAATGAATTGAAATCTACCCTGCAACACTACTGGTTTGGTACAAAACTACTTTGGGCCGATGTTAGGATT AGCTCTAGATTAATGTTGAAACTTGCCAATGGAAAGGGTCTGTCTAGAAGGGAGAGGCAGCAACTCACAAGGACAACAGCTGATATTTTCCGGCTAGTTC CTTTCGCTGTATTTATCATAGTTCCTTTCATGGAGTTCTTGTTGCCAGTATTCCTCAAACTGTTTCCCAACATGCTGCCATCTACTTTCCAGGACAAGAT GAAAGAACAGGAGGCACTGAAAAGAAGGCTAAATGCAAGAATAGAATATGCCAAGTTTCTTCAAGAAACTGTGAAAGAAATGGCAAAGGAAATTCAAAAT TCACGAAGTGGAGAGTTAAAGAAGACAGCAGAAGATCTTGATGAATTTATGAACAAGGTCAGAACAGGTGCCCGAGTTTCCAATGATGAAATTTTAGGCT TTGCCAAATTATTTAATGATGAGCTCACCTTGGATAACATTAGCAGGCCTCGCTTGGTAAATATGTGTAAATATATGGGTATCAGCCCATATGGAACTGA TGCATATTTGCGTTATATGCTCCGCAAAAGACTACAGGAGATCAAGAATGATGATAAAATGATTCAAGCAGAAGGTTTGAAGTCTCTTTCAGAAGCAGAG CTACGTCAAGCTTGTAGAGATCGAGGATTACTTGGATTACTTTCAGTGGAGGAAATGCGGCAACAGCTTAAGGATTGGCTGGATCTGTCTCTCAGCTATT CTGTGCCGTCTTCCCTCTTAATTCTTTCTAGAGCATTTTCTGTTTCAGGAAAGGTGAGGCCAGAGGAAGCTGTTCAAGCTACACTCTCTTCTCTGCCAGA TGAGGTTGTAGATACTGTTGGGGTGACAACTTTGCCCTCTGAAGATTCTGTTTCAGAAAGGAAGAGGAAGTTGGAATTTCTTGAAATGCAAGAGGAGCGA ATCAAGGAGGAGGAAGAGAAAGAGGAAGAGGAGCAAGCCAAAGTGTCAAAATCCATTGGTACTGAAATGGATTTGGCTATGGAAGAGACAACTATTTCAA CAACAAAACAAACAGAAGAAGAGGCAAAAACAAAGGCATGGGAAAAACGGGAGCAACTCTGTGAGCTCAGCCGCGCATTAGCTGTTTTGGCATCAGCATC TTCAGTGAGCAATGAGCGTGAAGAGTTCTTGAGGCTTGTTAGAAAGGAGATAGAGTTGTATAATAGTATGGTTTCCAAAGAGGGTAATGAAGGTGAGCTG GAAGCTAAGGAAGCTTATAAAGCTGCAAGGAAGGACAGTGATTCTGCACTTGAGGCGGCTGTTAGTGACAAGGTTTCTTCAGCTCTTGCTGACAGGGTTG ATGCTATGCTCCAGACTCTTGAAAAAGAAATTGATGATGTTGATGCTAAAATTGGAGATCGCTGGCGATTGCTGGACAGGGATTATGATGGGAAAGTGAC TCCTGAGGAGGTTGCTTCTGCTGCTATGTATTTGAAGGACACTCTTGGCAAAGAAGGAATTCAAGAGCTTATCAGCAACCTTTCCAAGGATAATGATGGG AAAATATTGGTGGAAGATATTGTCAAATTGGGCACCCAGAAAGAAGATGCTCATACAGATGAAGCAAGAATGTCATAGTGTTCTGTTTATCTCAATTTCA AGTAACCAATACCTCTTTTTATTTGTGAATTGACACATGGCCATGTTATCACTGACATGTAACTGGACCAGTATTAAAAATGTATTTATAGCCCCCCTCC CCTCCCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_138188; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_335343
| Blastp | Mitochondrial proton/calcium exchanger protein from Gallus with 47.34% of identity |
|---|---|
| Blastx | Mitochondrial proton/calcium exchanger protein from Gallus with 48.43% of identity |
| Eggnog | Leucine zipper-ef-hand containing transmembrane protein(ENOG410XRSP) |
| Kegg | Link to kegg annotations (422898) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449919.1) |
| Pfam | LETM1-like protein (PF07766.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |