Id Trinity | TRINITY_DN44707_c0_g2_i6 |
---|---|
Name Transcript | Ll_transcript_335347 |
Sequence | AGACACTTTTGGATTCTTCTAATCATAGGCTATAACATTATTTTTTCTTTTTACGCAGCCACATGTCCATGCCGTATCATATCTGTTTTTCATGCCATAT CCTTAATACCATTTCATCCAATACCTCTATTTTTATTTGTTCTGAATTTTGAGGGGAATGAGATGGAACCATCTTATTAATTATTACTAACTTTATTCCG CTATGTTCCATCATAAAATATATGGACAATAGTTTGGTCATTTCTTTAATATTTCTTTCCATTTCAATCATCAATAAATATCCCAACATATTAGTTTATA ATCTCTGCAGTTAACTTGTTGACCTTTTATGGAATAGAAAAATTCTTAGGTAAGTCAAATTGAAAGCCGGCATGTGTTGGATAGTATTGGTCGTGTTGGA AATGTGCATGTTTTACTGATTCGTTAAGATCTCCTCTAACATGATTTGTGGTGAAAAAAGTAATTTAAGTTTCACTTGCACTTTACAGGTGATAATTTAT GCATTTCCTGTGTTAACAAGGGAGAATTGATTAATGTTGCACCAAGTAGCTGCATGATAATGTATCCTTCCTTCTCCTCTGCATAAAAAGGCTGGAGCGT TGTTATGGCGTCAAGAGTGATTTTGAAAAGGAAAAAGAGCCTCTTGAGTGCCCTTGGTCAACCAACTCACGCACGCTTTATTCTTGGATTCTCGAGTCTT GGGCATGGGCAACCATTTGAGTCTACCGGCTTAAATGGTTTGAGCCAGTTTCCCCATAATCCATCTGCAACTACTGGACATAAACCGGAAACAAATAAAT TTTCTGTCAATAAGGATGATATAGCAGCATCAAAGTTTCTCTTGCATAGTTCCTTTAGAGTTTCAACTAATCGATATAGAACTGAGAAAACAGAGTTTAT TTCACTTCAAAGATCCTGGTGGGTATCTCAATATACACGTCACATTTCCACTACTCCAGCTGATCAACCTGGACTGGGTAGTGGTAATGAGAGAAAAGAG CAATCACCTGGTAAACAGAAGAAGGAAGCTTCACCAGAGGATTGTGATGAAGCTGTTGAAGGCTTGAGTACTGTAAAAGCACAAGCTAAGGCTAAATTGC AAGAATCCCATAAGGCTGATGAACCTATTTTAAAGAGATTATGGGCCAAGATTCTAGGAATTGGTCCAGCTTTCAGAGCTATTTTGTCAATGAGCAGGGA TGATTGGGCAAAGAAGTTTTCTCATTGGGGGAATGAATTGAAATCTACCCTGCAACACTACTGGTTTGGTACAAAACTACTTTGGGCCGATGTTAGGATT AGCTCTAGATTAATGTTGAAACTTGCCAATGGAAAGGGTCTGTCTAGAAGGGAGAGGCAGCAACTCACAAGGACAACAGCTGATATTTTCCGGCTAGTTC CTTTCGCTGTATTTATCATAGTTCCTTTCATGGAGTTCTTGTTGCCAGTATTCCTCAAACTGTTTCCCAACATGCTGCCATCTACTTTCCAGGACAAGAT GAAAGAACAGGAGGCACTGAAAAGAAGGCTAAATGCAAGAATAGAATATGCCAAGTTTCTTCAAGAAACTGTGAAAGAAATGGCAAAGGAAATTCAAAAT TCACGAAGTGGAGAGTTAAAGAAGACAGCAGAAGATCTTGATGAATTTATGAACAAGGTCAGAACAGGTGCCCGAGTTTCCAATGATGAAATTTTAGGCT TTGCCAAATTATTTAATGATGAGCTCACCTTGGATAACATTAGCAGGCCTCGCTTGGTAAATATGTGTAAATATATGGGTATCAGCCCATATGGAACTGA TGCATATTTGCGTTATATGCTCCGCAAAAGACTACAGGAGATCAAGAATGATGATAAAATGATTCAAGCAGAAGGTTTGAAGTCTCTTTCAGAAGCAGAG CTACGTCAAGCTTGTAGAGATCGAGGATTACTTGGATTACTTTCAGTGGAGGAAATGCGGCAACAGGTTATTTTTTAACAGGAATTTATGGCACTGAACC GCAATTCTCAAACCTTCAACTTGGTGTTAAATTACTAGGCTGGCAATTTGTGAATGAGAAACTGGTTTCAATTGCTACTTTCACAACCACTGTCTTCCTT TAATTTCCATTTCAGAACCTTTATCTTCTCATTAATGCTACTTTGGGAACCTTCATCTTGTACCTATTTCTAATCAAATGTAGTCAGTTATGTCAGATGT ATCTTTAAAATTTCTCCCAACACTTAAACACTTTTGTTTTTGATGTGTGACAAAAAGATAATGCCATATAAACAAAGGGTGGTAGGTGTAGTTATTAAAT GCAAGATGGATTGATAAGCTACAGATGTTCTTTGAAAAAAATTATTAGGATATTTCACTAAGAACTCCAAATAAAAGAAGCCACTTGTGGTTGAAAGTGA AACAAAATCTCATGTTTCGGGGGTGTCCTTTGTTATAATTCTTTGCAGCTTAAGGATTGGCTGGATCTGTCTCTCAGCTATTCTGTGCCGTCTTCCCTCT TAATTCTTTCTAGAGCATTTTCTGTTTCAGGAAAGGTGAGGCCAGAGGAAGCTGTTCAAGCTACACTCTCTTCTCTGCCAGATGAGGTTGTAGATACTGT TGGGGTGACAACTTTGCCCTCTGAAGATTCTGTTTCAGAAAGGAAGAGGAAGTTGGAATTTCTTGAAATGCAAGAGGAGCGAATCAAGGAGGAGGAAGAG AAAGAGGAAGAGGAGCAAGCCAAAGTGTCAAAATCCATTGGTACTGAAATGGATTTGGCTATGGAAGAGACAACTATTTCAACAACAAAACAAACAGAAG AAGAGGCAAAAACAAAGGCATGGGAAAAACGGGAGCAACTCTGTGAGCTCAGCCGCGCATTAGCTGTTTTGGCATCAGCATCTTCAGTGAGCAATGAGCG TGAAGAGTTCTTGAGGCTTGTTAGAAAGGAGATAGAGTTGTATAATAGTATGGTTTCCAAAGAGGGTAATGAAGGTGAGCTGGAAGCTAAGGAAGCTTAT AAAGCTGCAAGGAAGGACAGTGATTCTGCACTTGAGGCGGCTGTTAGTGACAAGGTTTCTTCAGCTCTTGCTGACAGGGTTGATGCTATGCTCCAGACTC TTGAAAAAGAAATTGATGATGTTGATGCTAAAATTGGAGATCGCTGGCGATTGCTGGACAGGTTTCTTCATAATTGCTGTTTTCTTTACGCAAACTATGA TATTTTCTAACGAAAGGCAATTAGCCAAACTCTATAAAAAATCCATAAAAGGACACAGCAGGTTGCGGAGGGGACTAATTTCATTGTTATATCGTGGAAC CTGTCATACAACAAATTGCTACTATTTTTTATTGGTGGCCTGTTCAGAAGAGATATTATTAAGAACTGAGTCAAAACTATGATTCCAACTAGTTATTATT GGATAGTTCGACTTAGTAAACAATCTTCAATAGGCGTGATTCCATCAGTTATAGATTTATTTAGCATTAGAATTAGAATCGATCGTGGTTGTCAATAGGA CTAGACTCCATTTTACCTGTTTTGTTGTTTCCTTTAGCAAATCAAGCTTTCCTTTTTGAGAAAAACAGCATGGCAGTAAGAAGTACATGAGATGCTTTAA TCACTGCATCATACCCCTACTTTCATTAAGTAGCTCTTTTGGCCCGACTGCCGTAGCAATCATCTCCTTTAATCACTGCATCATCCCCCTAATAGACTGA TAGACCCATGTCCCCTTGGTACCAGAAGTACATGAGGAAAGATAGAAAAGTAGGCAGCAGGTACAGATTGGACATATTCAAGCCACTGATCTACAGCATA ACAGTCTACCATCTGCCCACGTGGCAGTGAGAAAGTAGTGAGAAGGGAAATGCAGTAAGAGGGAGTGGGGATAAATGTGAAGGGAGCAGAGTAAAGGTAG GCAATTACTCAGTGATGGGGAGGACACACACCCTCAAAGTCTGCAGATTCTCTCTCGCTTTTTTTTTTCCAATTCAATCAAGAAAGACCTATCCCTATGG TAAGGATCTAGAGTCCATTTTTCTTGAGTAAAATTTATAGTGCCTATCTTACACGAAGTAAGATATTGCTGGTATCATGATAATTAAGATTTGCAAGGCT TTGACTTGCTTTAGACTGGTAGTGTCTGTTAAACAGTTCATATTCTGGCTGAAAATTAGGAAATACATCTGATCTATGACCCAGTTGATGGCAATCAGCA ATCTAATAATCTTGAGTTTTAACTCAACATTTTAGCAACTATGTTGCCCCACTTCCCAATTTGAATGATGAAAGAAAGGAGGTTAGTATCTCTGTGAAAT ATTTTCACATCCTGTGAAACAAATACTTATTAATACCCACAGGATTTGCTAAATCCTATTTCACTTTCAATTTTTTAACAGAGAATGAAATTTTTCACGT TCTTTGAAATAACTACTACATACATACCCGCTATGTTTTCCTAATGCTTTTGCACTTTCATGTTTTCACTGAAAATGAATCCATCATTTGGGAGCCTATT GATGAGTAAACTTCCTAATAATGATGTGTAGCCATATTCTTCTGGTAGGGATTATGATGGGAAAGTGACTCCTGAGGAGGTTGCTTCTGCTGCTATGTAT TTGAAGGACACTCTTGGCAAAGAAGGAATTCAAGAGCTTATCAGCAACCTTTCCAAGGATAATGATGGGAAAATATTGGTGGAAGATATTGTCAAATTGG GCACCCAGAAAGAAGATGCTCATACAGATGAAGCAAGAATGTCATAGTGTTCTGTTTATCTCAATTTCAAGTAACCAATACCTCTTTTTATTTGTGAATT GACACATGGCCATGTTATCACTGACATGTAACTGGACCAGTATTAAAAATGTATTTATAGCCCCCCTCCCCTCCCC BLAST |
Tissue | pods |
Gene name | LI_gene_138188; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_335347
Blastp | Mitochondrial proton/calcium exchanger protein from Gallus with 51% of identity |
---|---|
Blastx | Mitochondrial proton/calcium exchanger protein from Gallus with 51% of identity |
Eggnog | Leucine zipper-ef-hand containing transmembrane protein(ENOG410XRSP) |
Kegg | Link to kegg annotations (422898) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449919.1) |
Pfam | LETM1-like protein (PF07766.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |