Ll_transcript_335348

• Id Trinity: TRINITY_DN44707_c0_g2_i7
• Name Transcript: Ll_transcript_335348
• Sequence: CAAAAAATCAGAAAAAATATTAAAGAAATTCGAAAAGTGTTGTTCTTGATTTTGTATTCTCTTTCCACACACTACACATGATCTCTCAATTGAAGACGCA TAACATTTCCATAACCGATTCTCTTCAATGTTTCTTCTACCTTCAGGTGATAATTTATGCATTTCCTGTGTTAACAAGGGAGAATTGATTAATGTTGCAC CAAGTAGCTGCATGATAATGTATCCTTCCTTCTCCTCTGCATAAAAAGGCTGGAGCGTTGTTATGGCGTCAAGAGTGATTTTGAAAAGGAAAAAGAGCCT CTTGAGTGCCCTTGGTCAACCAACTCACGCACGCTTTATTCTTGGATTCTCGAGTCTTGGGCATGGGCAACCATTTGAGTCTACCGGCTTAAATGGTTTG AGCCAGTTTCCCCATAATCCATCTGCAACTACTGGACATAAACCGGAAACAAATAAATTTTCTGTCAATAAGGATGATATAGCAGCATCAAAGTTTCTCT TGCATAGTTCCTTTAGAGTTTCAACTAATCGATATAGAACTGAGAAAACAGAGTTTATTTCACTTCAAAGATCCTGGTGGGTATCTCAATATACACGTCA CATTTCCACTACTCCAGCTGATCAACCTGGACTGGGTAGTGGTAATGAGAGAAAAGAGCAATCACCTGGTAAACAGAAGAAGGAAGCTTCACCAGAGGAT TGTGATGAAGCTGTTGAAGGCTTGAGTACTGTAAAAGCACAAGCTAAGGCTAAATTGCAAGAATCCCATAAGGCTGATGAACCTATTTTAAAGAGATTAT GGGCCAAGATTCTAGGAATTGGTCCAGCTTTCAGAGCTATTTTGTCAATGAGCAGGGATGATTGGGCAAAGAAGTTTTCTCATTGGGGGAATGAATTGAA ATCTACCCTGCAACACTACTGGTTTGGTACAAAACTACTTTGGGCCGATGTTAGGATTAGCTCTAGATTAATGTTGAAACTTGCCAATGGAAAGGGTCTG TCTAGAAGGGAGAGGCAGCAACTCACAAGGACAACAGCTGATATTTTCCGGCTAGTTCCTTTCGCTGTATTTATCATAGTTCCTTTCATGGAGTTCTTGT TGCCAGTATTCCTCAAACTGTTTCCCAACATGCTGCCATCTACTTTCCAGGACAAGATGAAAGAACAGGAGGCACTGAAAAGAAGGCTAAATGCAAGAAT AGAATATGCCAAGTTTCTTCAAGAAACTGTGAAAGAAATGGCAAAGGAAATTCAAAATTCACGAAGTGGAGAGTTAAAGAAGACAGCAGAAGATCTTGAT GAATTTATGAACAAGGTCAGAACAGGTGCCCGAGTTTCCAATGATGAAATTTTAGGCTTTGCCAAATTATTTAATGATGAGCTCACCTTGGATAACATTA GCAGGCCTCGCTTGGTAAATATGTGTAAATATATGGGTATCAGCCCATATGGAACTGATGCATATTTGCGTTATATGCTCCGCAAAAGACTACAGGAGAT CAAGAATGATGATAAAATGATTCAAGCAGAAGGTTTGAAGTCTCTTTCAGAAGCAGAGCTACGTCAAGCTTGTAGAGATCGAGGATTACTTGGATTACTT TCAGTGGAGGAAATGCGGCAACAGCTTAAGGATTGGCTGGATCTGTCTCTCAGCTATTCTGTGCCGTCTTCCCTCTTAATTCTTTCTAGAGCATTTTCTG TTTCAGGAAAGGTGAGGCCAGAGGAAGCTGTTCAAGCTACACTCTCTTCTCTGCCAGATGAGGTTGTAGATACTGTTGGGGTGACAACTTTGCCCTCTGA AGATTCTGTTTCAGAAAGGAAGAGGAAGTTGGAATTTCTTGAAATGCAAGAGGAGCGAATCAAGGAGGAGGAAGAGAAAGAGGAAGAGGAGCAAGCCAAA GTGTCAAAATCCATTGGTACTGAAATGGATTTGGCTATGGAAGAGACAACTATTTCAACAACAAAACAAACAGAAGAAGAGGCAAAAACAAAGGCATGGG AAAAACGGGAGCAACTCTGTGAGCTCAGCCGCGCATTAGCTGTTTTGGCATCAGCATCTTCAGTGAGCAATGAGCGTGAAGAGTTCTTGAGGCTTGTTAG AAAGGAGATAGAGTTGTATAATAGTATGGTTTCCAAAGAGGGTAATGAAGGTGAGCTGGAAGCTAAGGAAGCTTATAAAGCTGCAAGGAAGGACAGTGAT TCTGCACTTGAGGCGGCTGTTAGTGACAAGGTTTCTTCAGCTCTTGCTGACAGGGTTGATGCTATGCTCCAGACTCTTGAAAAAGAAATTGATGATGTTG ATGCTAAAATTGGAGATCGCTGGCGATTGCTGGACAGGGATTATGATGGGAAAGTGACTCCTGAGGAGGTTGCTTCTGCTGCTATGTATTTGAAGGACAC TCTTGGCAAAGAAGGAATTCAAGAGCTTATCAGCAACCTTTCCAAGGATAATGATGGGAAAATATTGGTGGAAGATATTGTCAAATTGGGCACCCAGAAA GAAGATGCTCATACAGATGAAGCAAGAATGTCATAGTGTTCTGTTTATCTCAATTTCAAGTAACCAATACCTCTTTTTATTTGTGAATTGACACATGGCC ATGTTATCACTGACATGTAACTGGACCAGTATTAAAAATGTATTTATAGCCCCCCTCCCCTCCCC
• Tissue: pods
• Gene name: LI_gene_138188;
• Additional information: details;

Expression of Ll_transcript_335348

FPKM

• PAB: 33.7
• PNAB: 11.5
• PS1: 15.2
• PS2: 9.3
• PS3: 14
• PW1: 8.8
• PW2: 9.9
• PW3: 9.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_335348

• Blastp: Mitochondrial proton/calcium exchanger protein from Gallus with 47.34% of identity
• Blastx: Mitochondrial proton/calcium exchanger protein from Gallus with 48.43% of identity
• Eggnog: Leucine zipper-ef-hand containing transmembrane protein(ENOG410XRSP)
• Kegg: Link to kegg annotations (422898)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449919.1)
• Pfam: LETM1-like protein (PF07766.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;