Id Trinity | TRINITY_DN44707_c0_g2_i9 |
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Name Transcript | Ll_transcript_335350 |
Sequence | AGACACTTTTGGATTCTTCTAATCATAGGCTATAACATTATTTTTTCTTTTTACGCAGCCACATGTCCATGCCGTATCATATCTGTTTTTCATGCCATAT CCTTAATACCATTTCATCCAATACCTCTATTTTTATTTGTTCTGAATTTTGAGGGGAATGAGATGGAACCATCTTATTAATTATTACTAACTTTATTCCG CTATGTTCCATCATAAAATATATGGACAATAGTTTGGTCATTTCTTTAATATTTCTTTCCATTTCAATCATCAATAAATATCCCAACATATTAGTTTATA ATCTCTGCAGTTAACTTGTTGACCTTTTATGGAATAGAAAAATTCTTAGGTAAGTCAAATTGAAAGCCGGCATGTGTTGGATAGTATTGGTCGTGTTGGA AATGTGCATGTTTTACTGATTCGTTAAGATCTCCTCTAACATGATTTGTGGTGAAAAAAGTAATTTAAGTTTCACTTGCACTTTACAGGTGATAATTTAT GCATTTCCTGTGTTAACAAGGGAGAATTGATTAATGTTGCACCAAGTAGCTGCATGATAATGTATCCTTCCTTCTCCTCTGCATAAAAAGGCTGGAGCGT TGTTATGGCGTCAAGAGTGATTTTGAAAAGGAAAAAGAGCCTCTTGAGTGCCCTTGGTCAACCAACTCACGCACGCTTTATTCTTGGATTCTCGAGTCTT GGGCATGGGCAACCATTTGAGTCTACCGGCTTAAATGGTTTGAGCCAGTTTCCCCATAATCCATCTGCAACTACTGGACATAAACCGGAAACAAATAAAT TTTCTGTCAATAAGGATGATATAGCAGCATCAAAGTTTCTCTTGCATAGTTCCTTTAGAGTTTCAACTAATCGATATAGAACTGAGAAAACAGAGTTTAT TTCACTTCAAAGATCCTGGTGGGTATCTCAATATACACGTCACATTTCCACTACTCCAGCTGATCAACCTGGACTGGGTAGTGGTAATGAGAGAAAAGAG CAATCACCTGGTAAACAGAAGAAGGAAGCTTCACCAGAGGATTGTGATGAAGCTGTTGAAGGCTTGAGTACTGTAAAAGCACAAGCTAAGGCTAAATTGC AAGAATCCCATAAGGCTGATGAACCTATTTTAAAGAGATTATGGGCCAAGATTCTAGGAATTGGTCCAGCTTTCAGAGCTATTTTGTCAATGAGCAGGGA TGATTGGGCAAAGAAGTTTTCTCATTGGGGGAATGAATTGAAATCTACCCTGCAACACTACTGGTTTGGTACAAAACTACTTTGGGCCGATGTTAGGATT AGCTCTAGATTAATGTTGAAACTTGCCAATGGAAAGGGTCTGTCTAGAAGGGAGAGGCAGCAACTCACAAGGACAACAGCTGATATTTTCCGGCTAGTTC CTTTCGCTGTATTTATCATAGTTCCTTTCATGGAGTTCTTGTTGCCAGTATTCCTCAAACTGTTTCCCAACATGCTGCCATCTACTTTCCAGGACAAGAT GAAAGAACAGGAGGCACTGAAAAGAAGGCTAAATGCAAGAATAGAATATGCCAAGTTTCTTCAAGAAACTGTGAAAGAAATGGCAAAGGAAATTCAAAAT TCACGAAGTGGAGAGTTAAAGAAGACAGCAGAAGATCTTGATGAATTTATGAACAAGGTCAGAACAGGTGCCCGAGTTTCCAATGATGAAATTTTAGGCT TTGCCAAATTATTTAATGATGAGCTCACCTTGGATAACATTAGCAGGCCTCGCTTGGTAAATATGTGTAAATATATGGGTATCAGCCCATATGGAACTGA TGCATATTTGCGTTATATGCTCCGCAAAAGACTACAGGAGATCAAGAATGATGATAAAATGATTCAAGCAGAAGGTTTGAAGTCTCTTTCAGAAGCAGAG CTACGTCAAGCTTGTAGAGATCGAGGATTACTTGGATTACTTTCAGTGGAGGAAATGCGGCAACAGCTTAAGGATTGGCTGGATCTGTCTCTCAGCTATT CTGTGCCGTCTTCCCTCTTAATTCTTTCTAGAGCATTTTCTGTTTCAGGAAAGGTGAGGCCAGAGGAAGCTGTTCAAGCTACACTCTCTTCTCTGCCAGA TGAGGTTGTAGATACTGTTGGGGTGACAACTTTGCCCTCTGAAGATTCTGTTTCAGAAAGGAAGAGGAAGTTGGAATTTCTTGAAATGCAAGAGGAGCGA ATCAAGGAGGAGGAAGAGAAAGAGGAAGAGGAGCAAGCCAAAGTGTCAAAATCCATTGGTACTGAAATGGATTTGGCTATGGAAGAGACAACTATTTCAA CAACAAAACAAACAGAAGAAGAGGCAAAAACAAAGGCATGGGAAAAACGGGAGCAACTCTGTGAGCTCAGCCGCGCATTAGCTGTTTTGGCATCAGCATC TTCAGTGAGCAATGAGCGTGAAGAGTTCTTGAGGCTTGTTAGAAAGGAGATAGAGTTGTATAATAGTATGGTTTCCAAAGAGGGTAATGAAGGTGAGCTG GAAGCTAAGGAAGCTTATAAAGCTGCAAGGAAGGACAGTGATTCTGCACTTGAGGCGGCTGTTAGTGACAAGGTTTCTTCAGCTCTTGCTGACAGGGTTG ATGCTATGCTCCAGACTCTTGAAAAAGAAATTGATGATGTTGATGCTAAAATTGGAGATCGCTGGCGATTGCTGGACAGGTTTCTTCATAATTGCTGTTT TCTTTACGCAAACTATGATATTTTCTAACGAAAGGCAATTAGCCAAACTCTATAAAAAATCCATAAAAGGACACAGCAGGTTGCGGAGGGGACTAATTTC ATTGTTATATCGTGGAACCTGTCATACAACAAATTGCTACTATTTTTTATTGGTGGCCTGTTCAGAAGAGATATTATTAAGAACTGAGTCAAAACTATGA TTCCAACTAGTTATTATTGGATAGTTCGACTTAGTAAACAATCTTCAATAGGCGTGATTCCATCAGTTATAGATTTATTTAGCATTAGAATTAGAATCGA TCGTGGTTGTCAATAGGACTAGACTCCATTTTACCTGTTTTGTTGTTTCCTTTAGCAAATCAAGCTTTCCTTTTTGAGAAAAACAGCATGGCAGTAAGAA GTACATGAGATGCTTTAATCACTGCATCATACCCCTACTTTCATTAAGTAGCTCTTTTGGCCCGACTGCCGTAGCAATCATCTCCTTTAATCACTGCATC ATCCCCCTAATAGACTGATAGACCCATGTCCCCTTGGTACCAGAAGTACATGAGGAAAGATAGAAAAGTAGGCAGCAGGTACAGATTGGACATATTCAAG CCACTGATCTACAGCATAACAGTCTACCATCTGCCCACGTGGCAGTGAGAAAGTAGTGAGAAGGGAAATGCAGTAAGAGGGAGTGGGGATAAATGTGAAG GGAGCAGAGTAAAGGTAGGCAATTACTCAGTGATGGGGAGGACACACACCCTCAAAGTCTGCAGATTCTCTCTCGCTTTTTTTTTTCCAATTCAATCAAG AAAGACCTATCCCTATGGTAAGGATCTAGAGTCCATTTTTCTTGAGTAAAATTTATAGTGCCTATCTTACACGAAGTAAGATATTGCTGGTATCATGATA ATTAAGATTTGCAAGGCTTTGACTTGCTTTAGACTGGTAGTGTCTGTTAAACAGTTCATATTCTGGCTGAAAATTAGGAAATACATCTGATCTATGACCC AGTTGATGGCAATCAGCAATCTAATAATCTTGAGTTTTAACTCAACATTTTAGCAACTATGTTGCCCCACTTCCCAATTTGAATGATGAAAGAAAGGAGG TTAGTATCTCTGTGAAATATTTTCACATCCTGTGAAACAAATACTTATTAATACCCACAGGATTTGCTAAATCCTATTTCACTTTCAATTTTTTAACAGA GAATGAAATTTTTCACGTTCTTTGAAATAACTACTACATACATACCCGCTATGTTTTCCTAATGCTTTTGCACTTTCATGTTTTCACTGAAAATGAATCC ATCATTTGGGAGCCTATTGATGAGTAAACTTCCTAATAATGATGTGTAGCCATATTCTTCTGGTAGGGATTATGATGGGAAAGTGACTCCTGAGGAGGTT GCTTCTGCTGCTATGTATTTGAAGGACACTCTTGGCAAAGAAGGAATTCAAGAGCTTATCAGCAACCTTTCCAAGGATAATGATGGGAAAATATTGGTGG AAGATATTGTCAAATTGGGCACCCAGAAAGAAGATGCTCATACAGATGAAGCAAGAATGTCATAGTGTTCTGTTTATCTCAATTTCAAGTAACCAATACC TCTTTTTATTTGTGAATTGACACATGGCCATGTTATCACTGACATGTAACTGGACCAGTATTAAAAATGTATTTATAGCCCCCCTCCCCTCCCC BLAST |
Tissue | pods |
Gene name | LI_gene_138188; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_335350
Blastp | Mitochondrial proton/calcium exchanger protein from Gallus with 47.34% of identity |
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Blastx | Mitochondrial proton/calcium exchanger protein from Gallus with 48.43% of identity |
Eggnog | Leucine zipper-ef-hand containing transmembrane protein(ENOG410XRSP) |
Kegg | Link to kegg annotations (422898) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449919.1) |
Pfam | LETM1-like protein (PF07766.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |