| Id Trinity | TRINITY_DN44712_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_335470 |
| Sequence | TAAACCAAAGATAGATCCAAAAATTGGTAGTTGGAAATTGGAATGATTTGGTATTAATATATTGTGCAATGAAGTTTTTGTTGGTGAAATAATAACCCAT GGCAATGGCTTGGTGCATACCCAAATATGCTCCTACTTCATTTTGTTCTTCTCTTTTCTCTTCCACCAAAAAACCTAATTCTCATCCCTTTTCATTTTCC ACTTTCTCATCATCATCTTATTCAACTGTGTTAGCCACTCCCACATTCACATGGAACGATATTTTGAACATTTCTCAATCTTCTACATCTATTCAACAAC AACACCCTTCTTCTTATCTCCAAGGCTTCTTTCACAAACTTCAACTTTGCAATCGTGGCTCTGAAAAACAATCAGAATTCCTTTCATTTGTCGTTGAGGG CCAAGTTGTCGGATTCATTCACAATGGGTTTGCTGAGTATTTGAAGGGCTTCAGTGATGTGTTCATTTTCCCCAAAGATAAATCTAATGGCAATCCCTTT GGTAACTGTGTTTCATTGCATCCGATGCTGAAGACTTATGAAGAAAGGACCAGTGCAGTCGGATATGTAGTAGAGCGTTTGGGGGAGGAGCGAATTCCAG CTATACCCTGTGACATCATCATTTGGTGCACCCATATTCTTCTCATTAGAACGTGCTGCAGCTCCTTATTTTGGCATAAAGGCTTATGGAATCCATATGA ATGGCTATGTTGAGCTGGATGGACAGAAGCACCTTTGGATAGCAAAGAGAAGTAGCACGAAACCCACATATCCTGGAATGCTTGATCATCTTGTTGCTGG AGGACTGGTTTGTAGTTTCATTTTCACATTTGTTTCCAAAGTTGGTCAATTGAATGCTTAAAACCTGAGCCTGTGTAATGTTTAAACATTTCTCGTCAAG AACACTAGTAGTATATGGGTAAATAGTTTTGGCTTTAATAATGTGCAACCAGTGAATGAGGAAATCAATATGAGCTAATAAGATCAATTTAATATTAATT GTTTCCTTCAGTCCAATGTTATCATTGTACTTCTGAGCTAATTTCTATCGTCACAGCCACATGGAATTGATTGTCACGAGAATGTCGTGAAGGAATGCGA AGAGGAAGCAGGAATACCAAGGCCCATCTCTATTAAAGCCATACCCGTTGGTGCTGTTTCTTATATGGACATTGATGAGTATAGATACAAGAGAGATGTT CTATTCTGTTATGATCTAAAACTTCCAGAAAGCTTTGTACCAAAAAATGAAGATGGAGAAGTTGATAGCTTCAAGTTGATCCCCGTTGTGCAAGTTGCAG AAGTCATAAGGAAGACACAGTTTTTCAAGCCAAATTGCTCTCTTGTAATCATTGACTTCTTGTTTCGACATGGGTACATCAGTCCTGAATGTTTTGGATA TTTGGATCTCTTAAGAAGCTTAAGAATAGGAGATTGCTCCTAACACAGAAAGCTTCATGAATAGAAACTTTACCAATCATTTATTTGTTGAGTTTCTACA GATCTTATTTCCCCTTATATTATATATGTGCTGTCCAGTTTGAAGATTAAAGCTACTCATCTTCATCGTGAGTAATTGAAAAGTGGTTAATTTAATATTA TCTTAATCTCTTGGATTGTATTTTTGTTCAGTAATGTCTTCTTAGACTTGGGTACTTCTTTTTTTGTGGTAACTTGTATTCAACAATTGGTATGTGAGGG TCTCAACTCTCAATAGGACATTAAACATGTTCAAAGATATAACATGCAAAATCTTTGATAAATGATAAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_138197; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_335470
| Blastp | Nudix hydrolase 24, chloroplastic from Arabidopsis with 44.27% of identity |
|---|---|
| Blastx | Nudix hydrolase 20, chloroplastic from Arabidopsis with 75% of identity |
| Eggnog | Nudix hydrolase(COG0494) |
| Kegg | Link to kegg annotations (AT5G19470) |
| CantataDB | Link to cantataDB annotations (CNT0000325) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458672.1) |
| Pfam | Domain of unknown function (DUF4743) (PF15916.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |