Ll_transcript_335174

• Id Trinity: TRINITY_DN44717_c0_g1_i2
• Name Transcript: Ll_transcript_335174
• Sequence: CGCGTATCCGCTTCAACAAGGATGGAGCTCTTTTAGCTGTCTCTGCTAATGAAAATGGAATTAAAATTCTAGCCAATGGAGATGGTATTCATTTGTTGCG TTCACTAGAGAATTCTTTATATGATGCATCAAGAACATCAGAAGCCATTGCTAAGCCTACAATAAATCCAATTTCAGCTGTTGCCGCCGCTGCAACTAGC GCCGCACTTGCAGAGAGGGCATCATCCGTAGCAGCTATTGCTGGAATGAATGGGGATACCCGAACATTGGGAGATGTTCAACCTAGAATTAGCGAGGAAT CCAATGACAAGTCAAAGATATGGAAGCTCACTGAAATCAATGAACCATCTCA
• Tissue: pods
• Gene name: LI_gene_138207;
• Additional information: details;

Expression of Ll_transcript_335174

FPKM

• PAB: 0.2
• PNAB: 5.8
• PS1: 6.1
• PS2: 3.4
• PS3: 4.8
• PW1: 2.8
• PW2: 2.9
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_335174

• Blastp: Protein TOPLESS from Arabidopsis with 60.68% of identity
• Blastx: Protein TPR3 from Oryza sativa with 59.17% of identity
• Eggnog: Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for(ENOG410XP3K)
• Kegg: Link to kegg annotations (AT1G15750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457960.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;