Ll_transcript_335168

• Id Trinity: TRINITY_DN44726_c0_g1_i3
• Name Transcript: Ll_transcript_335168
• Sequence: TCTGAACACTATACTGTCCTCCATCATCTGTTTCCCCTCATGCCTTGAAAGTGAATAATAATTATCAGAGAAATTCTCTCTAAACCCTAAACTCCTGAAT TTGTACAATTTGCCATGCCGCGCCACCACTGTCTGAAATAGGTTTGTGAAGACTCCACTTTTGACAAATTAGGTGGATTCTTACTTTTTTTTGTGCTGCT ACTTCTGACACAATCGATCCATGTTGTATTCTAAAAGAGCGTCACTGCCTACAATTAGTTCTCTTAGGAAGTTATGCATTCAATACAAGTGTTGTTCGCG CAATGTCACGGATTGTGTCAAAACACTTAATACATTGAGGGCTATTAGCACTGCCGCCGAGAAGTCAGATTTTCAGCTTTCTGGTGCTCATCAGACAGAT GATTCTGTGGGTTATCAGCAAAATCATGCTGGGTATTATCGGGGACAGTATAGTAATGCAGATTCTCAGAAGTCAGTACAAAGTCCGGAATATGTTGCTC ATGCAAATACGACAACATATAGAGAACAAAATCGGCCGGGCCTAAACCAGAACTGGGGTTATACAGGAGGTATGTGTAATGATCATGGTGGGAATTTTAG TGGGTCTTATGGAAATAATCATGGCAGTTCAGAGAAATTTTCTCATGGAGCTGGTCACATTGCAGATGCAGGTCGTAGAAGTCTTTCTGGAAATGGAGTT CAGAACAATTTGGTTGGATATAATGGGACGGTCAATGAGTACCATGGTCAAAGCAACACTAAAATGCAACAGAACTTAGTTGGGGATGGTTTTAATAATT CATGGGCCTATGAGAAGCATCCAAATGCATTTGTTGAGAACCACAATGGGACACAAGAACCTAGAAAATGGATGCAGCCCCCAGATGCATATAGTTCACC CAGGATGTTTGAATCTCAGAGAAATCTTAACGGAAACCTTACTCAAAACACAGGTTACTTTCAGCCATCACCAAATGATCATTACTCGAGGAGTAATGAA ATGTCTCAACAATACTTAGGTTCTGTACAACATCAGCAGAATCTAGAAGATGCTCAGTATCCTGCACACTTAAATAATGTGGATAGATCAATTGATGCCT TTCATCAATCAAGTAATGCATATCCTGATGGTGGATCAGTTGATGGATCTAATGTTGCTCCACATGGTACGCTTGAGCAACTAGATTATTTATGCACAGA GGGCAAAATGAAAGAAGCAGTTGAAGTTTTGGAATTATTGGAAAAACAACATATTCCTGTGGATTTGCCTCGATATTTGAAATTAATGAGCCAGTGTGGT GAGGCTAAATCTCTTGAAGAGGCCAAAATTTTACACAGGCATGCTTTGCGACATTTGTTGCCTCTCACAGTCAGCACATATAATAGAATATTGGAGATGT ATTTTGAATGTGGTTCTGTAGATGATGCAGTTGAGGTATTCAATAACATGCCAGAGTGCAATTTGACTACTTGGGATACTATGATAATGCAGCTCGCCAA GAATGGGTTTGCAGAAGATTCACTTGATCTATTTACTCAATTTAAAAAGTCTGGATTGAAACCTGATGGTCAAATGTTCATTGGGGTCTTTAATGCATGT AGCATGCTGGGAGATATTGATGAGGGAATGCTGCACTTTCAATCCATGAACAAAGATTATGGCATTGTACCATCATTGGCCCATTTTGTCAGTGTAGTAG ACATGATTGGCAGTAGTGGGCATCTTGATGAAGCATTTGAATTCATTGAAAAGATGCCAGTTGAGCCGAGCGTTGATGTATGGGAGACTTTGATGAATCT TTGTAGAGCTCATGGGAACACTGAGCTGGCAGATCGTTGTGCTGAACTAGTTGAGCAGCTGGATCCTGCCCGATTAAATGATCAATCGAAGGCTGGCCTT TTACCTGTAAAAGCTTCAGACTTGAATAAAGAGAAAGAAAAGAAATTAGCAAGCAAAAATCTTCTAGAAGTAAAGAGCCGAGTACATGAATATCGAGCAG GAGATACTTCTCATCCTGAAAATGATAAGTTGTATGCTTTGCTTAGAGGTATGAAGTCACAAATGAAAGAAGCTGGCTATATTCCTGAGACAAAATTTGT GTTGCATGACATAGACCAGGAAGGCAAAGAAGAAGCTCTTCTCTCTCACAGTGAGAGACTTGCTGTTGCTTATGGTCTCCTTAGCAGTTCTGCTCGCTCT CCTATCCGAGTGATTAAGAACCTCCGTGTTTGTGGTGATTGCCATAATGCCCTGAAGATTATTTCTAAGCTTGTAGGCAGAGAACTAATCATGCGAGATG CTAAAAGGTTTCACCATTTTAAAGATGGGATATGCTCTTGTCGGGATTATTGGTGAACAACATGAATATAGGTGTATCATGACTTCAACCTGGATTGAAT GGCATGGATTCTGATAATGTTATAACCCCTCCAGCTAACTCATGTCGAAATTATTCATATATCATTGGAGTTTGTTTCACCAGGCTCTTCCACACTGAGG TGTATAAATCAAGCAGTGGGATGTGCATTCAGGTTACAAGGAGTTATTATACCCAAAAAAAGGTCACAAGGAGTTATTGTTGTTGAGTAGTTTGATGCAG TTTCTTGTTGTAGCTTCCATAAAAGAATGAATTACTATTGCACTCCATTTCCAGAAGGAGTTGATCTAATTTATATGAGATTGAAATTAATCTTACCATT TCAGAATTTTTGCTATCATATCTTCATTAACACAGCTCAGAAATAAACTTTGTTGAGTTGTTATAGTCAAACTTGTTTGTCTTGCCTGCATTTCTTTTGA ATCAAAGTGCTAGCTGGTATGGAAATGAACCTTACAGTTTTTCTGCTGAATATTTATTTATATCTTTTGTGGCAGGGTTGTGTTCCTCTTGTCAAGTGGC GCAGCTGTGAGCATTTGCATTACTTGATAATTGGTGTAATAAGTTTTTGTATTCTCAACTATTCCCTATATATTCCTCTATTTCTGCTGCAATTTCATGG GTATTATAATGCCAACAATGGCTGAGATTAAGAACAACCAAGTCTTAGTAATCCATACTAGATGGAGTTGGCTACATGAGATGGTTAGCCTCATGGTTAA AGTAATAAACTGAGTTTGTTATGGTGTCCAATGTGATATTCCTTATATATTGATGATGTACTGATATTCTAAAATTCTTTACATTAAGTTTTTATATAAT GAATACTAGCTTGTTTCTCAA
• Tissue: pods
• Gene name: LI_gene_138229;
• Additional information: details;

Expression of Ll_transcript_335168

FPKM

• PAB: 0.1
• PNAB: 1.8
• PS1: 2.1
• PS2: 1.2
• PS3: 1.7
• PW1: 0.3
• PW2: 0.8
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_335168

• Blastp: Pentatricopeptide repeat-containing protein At2g25580 from Arabidopsis with 55.58% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g25580 from Arabidopsis with 55.58% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G25580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464211.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;