| Id Trinity | TRINITY_DN44747_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_335416 |
| Sequence | CTTTCGATCACAATTGAGGTTGCAATATTGTATTTCCGAATCTCCGCAACCGCATCATGACCGCTTATGCCGCATTTTCCCAAAGATTGCGAGATAAGCA CAAAAGCAATCTTTAGGAAACTAATTCCTTTCGGGATGATGTGTGACTGGCCCTCTCAACAAGAGTCCCTCACAGAAATCGAATTCTTGAACTTTTAGTT TATCTATATCTATGACCACCCCTCCCAACAATTGCCCTCATTACACTTATTATAAGTATTACGATGACTAATAGATAATTTGTAGATTTGACTGCATTAT ACTGAAAACCTCTTTGTTTCATAACTCACATTCATCAATTGAGGAATTATTTTTCGTTGATCTGTGCAATGTGTTGTGTTCAGGGTTGATTGTATCAACT GCGCTGATATTGTGGAAAGGGTTAATGTGTATAACCGGCACTGAATCTCCAGTAATTGTTGTTCTTTCTGGTAGTATGGAACCAGGATTCAGAAGAGGTG ATATTTTATTCTTGAGCATGAGCAAGGATCCCATTCGTGCAGGAGATATTATTGTTTTCAATATAGATGGACGTGAAATTCCAATTGTTCACCGTGTTAT TCAGGTTCATGAACCAAACAACGTTAAAGAAACCTTCATGCTCACTAAAGGAGACAATAATCCTATGGATGATAGGGTGTTGTACAATTATGGTCAAAAT TGGTTGCAGCGACACCATATTATGGGAAGAGCTGTTGGGATTTTACCCTACGCTGGATGGATGACGATAATCATGACTGAAAATCCTATTGTCAAGGTTT GTTTTTTCTTTGTAATTTAAATATATTTTTTTAAATATTCTCCTATTTTCCTTGTTATGTGTTGGCTATCGATTATTATCTAATACAACATTCACGCTGG CTATGTGTAGTGTGAAACATTGCCGTGTGTCAGCCGATTCCATCTAGCGGATGTTGTTGTATTATTTTTTCCTTTTCTTCTCAAATTAGGAGTCAAGAAT GATCAATATCTGGTTTTATGTTTTGTTATCTTCCCATGAACACACTAACAATATAATTAAATCTTTAACTAAACTACTAACAAAATGGGAATAGAAATCA TGGAGATATTTATAATTCTTACACTATTTAACATTTGAAAACACAATGCGTTGTTGCCTGACAATTTTCTTGGATTTTCGATCTCTTAATTCACTTAATT GCTTTGTGTTTTCTAATTTACTCCAATTACTTTCTGTGAATGTTTAATATTTCATTTCTCGAAAATTGGATTTTTTATTTTTATTTTCCATATTATATCA TTTTCATTGGTGTATTGTAGAGTCCACTTATTCATTTGCAACATAAATCATCTTATTCCAAATGTGTCTCTTCCCATGTCCCAATTAAATCAGATATTAG CACATAAAGAAATATATATTTTAAAAACAAAACGTAATATTTTTATACTAGTTAAACTCTGACCGATCCCAGACAAGAAATAATGACACTATTAGAGACA TGTGATCTCTATTGATCATGTCTTTTCAGTTCTACCTCATCTCAAGTTCTTGTTAAGTTTCTCTCATGCACAGTTTTTTTTAATTACTAATTAGTCTTAT TTTCTTGCAGTACGTACTCATTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_138263; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_335416
| Blastp | Signal peptidase complex catalytic subunit SEC11C from Mus with 58.33% of identity |
|---|---|
| Blastx | Signal peptidase complex catalytic subunit SEC11C from Pongo with 60.99% of identity |
| Eggnog | Signal peptidase i(COG0681) |
| Kegg | Link to kegg annotations (66286) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416141.1) |
| Pfam | Peptidase S24-like (PF00717.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |