Id Trinity | TRINITY_DN44747_c0_g1_i4 |
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Name Transcript | Ll_transcript_335421 |
Sequence | CTTTCGATCACAATTGAGGTTGCAATATTGTATTTCCGAATCTCCGCAACCGCATCATGACCGCTTATGCCGCATTTTCCCAAAGATTGCGAGATAAGCA CAAAAGCAATCTTTAGGAAACTAATTCCTTTCGGGATGATGTGTGACTGGCCCTCTCAACAAGAGTCCCTCACAGAAATCGAATTCTTGAACTTTTAGTT TATCTATATCTATGACCACCCCTCCCAACAATTGCCCTCATTACACTTATTATAAGTATTACGATGACTAATAGATAATTTGTAGATTTGACTGCATTAT ACTGAAAACCTCTTTGTTTCATAACTCACATTCATCAATTGAGGAATTATTTTTCGTTGATCTGTGCAATGTGTTGTGTTCAGGGTTGATTGTATCAACT GCGCTGATATTGTGGAAAGGGTTAATGTGTATAACCGGCACTGAATCTCCAGTAATTGTTGTTCTTTCTGGTAGTATGGAACCAGGATTCAGAAGAGGTG ATATTTTATTCTTGAGCATGAGCAAGGATCCCATTCGTGCAGGAGATATTATTGTTTTCAATATAGATGGACGTGAAATTCCAATTGTTCACCGTGTTAT TCAGGTTCATGAACCAAACAACGTTAAAGAAACCTTCATGCTCACTAAAGGAGACAATAATCCTATGGATGATAGGGTGTTGTACAATTATGGTCAAAAT TGGTTGCAGCGACACCATATTATGGGAAGAGCTGTTGGGTAATTTTTCACCCTTTTTTCTAGGGACAAATACTATCATTTACATGTTGTCTGACTGAATC TTAGGACTAAGCTTGATCTATTTCTTCCATTTTGGTTACATCATAGAGGATTACTTTTTATTGAGCAAAGGTCTAGAACTATAAAATATATCGTCGTTAT ATTGAGCAGATTTCACCTTAATATTAAGCTTGATCTGTTTATTCTATAAATAAGTACATTCCTCCTCCTCCCTTCCATTCTTCCATTCTTGTCTACAAAA ACTATGGGTTCTCCCTATACCAGGAACCAGCTTCAGAATAAGAGCTGTTCAAAAAACCCAAAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_138263; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_335421
Blastp | Signal peptidase complex catalytic subunit SEC11C from Pongo with 62.26% of identity |
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Blastx | Signal peptidase complex catalytic subunit SEC11C from Mus with 61.6% of identity |
Eggnog | Signal peptidase i(COG0681) |
Kegg | Link to kegg annotations (100174381) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416141.1) |
Pfam | Peptidase S24-like (PF00717.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |