Id Trinity | TRINITY_DN44774_c0_g2_i5 |
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Name Transcript | Ll_transcript_335564 |
Sequence | GGGCGGAAGAGAGGAAACGAAGTGGTTTTTGATTCTGTGATGTTCGTCGGTGGTTCCTTAACTTCAAAGCGGAGAAAAGTCACCACTTTTTATTCAATGG CTTCTCAATCTTCTAAGGCCAAGCTTGCAGATTTGAAAGAAAGATTTGGACGAGAGATCCGTGTTTTTGAAACGTCAGTACTTTCTCCATCTTCAAATGC TGCTTCATCCAATGGAGAGGAGACTGATGACTTCTATGAGTTCACTTCTGAAGATTATTTCCGAATTTTGGCTACTAAAAAGGAAGATAAATTCTTGAAG ACTCGAAAACTCCGAGAAGCAGATGAGAAGTCTCGTAGGTCAAAAATAACAAAAGCTGTCATCAGAGTTCGGTTTCCCGATAATCACACATTGGAGGCTA CTTTTCACCCATCAGAAACAATCCAGAGTTTAATTGATCTCCTCAATAAAGTGATTGCACAACCAGGGCAGCCATATTATATATATACTACTCCGCCTAA GAAGGTCGTCAACGACTTGTCTCAGGATTTTTATACAGCTGGCTTTTGTCCTGGTGCAATTGTGTACTTTTCATACAATGTTCCAAAAGGTGATAGTACT GTGGTTGACCATATCGGCCATTACCTCCGTGACGAGATCTTATCTTTGAAGGACTTGGATGTTTCTAATGACGAAGGCCAACAATCCGAGCCAGAGCAGC CTGCGCCAGAGCCAGCGGAGGCAACACGACGCCCTCCTATCGAAGAACGTAAACCTGCTGAGAAAAAACTTGTTAAACCAAAGTGGCTAAAAATGTGATA TCAGTTTCCAAGAAGATCCAATTGTCATTGTTTGTTGCAAAGAAGCTTTTCACAATGTGCTCTATATGTATACCTAAAAATGGGATCATAGGGTTGACCC TTCTTGTGGCTAATTCAGCCTTTGCTTCTTAGTTCATTGTATCTTCGTTAAGTCCACAAGAACAAGTTGTTTTTGCTTCTCTAAAATCTCCCCCTAAGTC ACACCCCTTTATCCTCCTTTTTTTCTTTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_138311; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_335564
Blastp | Plant UBX domain-containing protein 1 from Arabidopsis with 59.83% of identity |
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Blastx | Plant UBX domain-containing protein 1 from Arabidopsis with 57.65% of identity |
Eggnog | alveolar soft part sarcoma chromosome region, candidate 1(ENOG410XQQK) |
Kegg | Link to kegg annotations (AT3G27310) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458026.1) |
Pfam | UBX domain (PF00789.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |