Ll_transcript_335156

• Id Trinity: TRINITY_DN44792_c0_g1_i5
• Name Transcript: Ll_transcript_335156
• Sequence: ATATGGTAGAGTGTTCCTTCTAAGTTCTAAAATATAGTAAATTTTAAATGAAAATAAATATTTCACTCTTACAAATATTTAAAGAAAAAACTATCATCAA AAGCCCTAAAAGCAAAAATTATATGACAGTGATAAAATATGTTTGTTACAATCAGGAATAACCCATTAACATGTGAATTAATAGATAACTGTGAAACAAA ATCTTTTGAATAGGGTGCAAAAATTTTACATCAACTATTTATTTATTACGGAACTAAGGTCGTAGCTCTCTCTGCGTCTCCAGAGAGGTAAAACCGAGTC ACATTTCAGGTTTGAGATTTTCTTTTATTCCCCAATCAATAAAATTCTCCAAAGATATCCTTTTTGTTTTCTATAAATCGTTATGTATCGGTTGAATTGA TTTCCCAAACTTCGGTTCAATTATAGTGATTTCATAGTAATTCTTTTAGATCATGCACATTATCTGTTTGCTAAAATGTCTCAAATAGAAATTTAACTTG GGTGTTCATAAGGCTTTACCTTCCAATTATGTCGCTTTGAGGTAATGCTAATTTTGAAATGTTGGTCAAATCCTTTGAACGGAACCACTCAATTTTGCAT CTCTCTCTCAAATTGCCTTCAACGCTCTATCTATATCCATGTGCCATCCATAATAATCTTCCTCTGTCGACTCTACTGTCATTAACATCTTGTTTTAATT AGTATATAGAAGTTCTCCTTTAAAACTTATGCACTCAATTATAGCTGCCTAATATTGATGTATGTGTGATTAAAATTTTAGACGAGTTCAATCATTTGAT ATTATTGTATACTAGAGATTTATACCGGTGAATGGTGATTTTTTATTTTATTTTTAGTGTGGGTTTCATGATATGTGTTATTGATCATTAATCTATACCT CTTTAGTTTATTTTCTGTTAATCATGAAGGCATAAAGTTTAGGTAAGGAAAAGAAGAGGGGGGACAAGAAGTTGAAAGCAGCAGCATGGTGGTATCTAGT ACCAATCCCCATAATAAGGAGATTGCAATCAGGAGAAGGATTGCTAGCATATTCAATAAACGTGAAGACGATTTCACATCTTTGAGAGAATACAATGATT ACTTGGAGGAAGTAGAGGACATGACCTTCAATTTAATTGAAGGGATAGATGTTGCTGCTATTGAAGCGAAAATTGCTGAGTACCAGGAAGAAAATGCAGA GCAAATAATGATTAATCGAGCCCGAAAGGCAGAAGAGTTAGCTGCAGCTCTGGCAGCAAGCAAGGGGAAACCTGCACAAGCTGACAATGATGTGGCTGCA AACCAAAACTCTCATGCGGAAGGAGTTAGTGGTGTTCCACAAGGACAATATGCACCTACATTTGCAGGACAGCCAAGACCCACAGGCATGGCCCCACAAC CTTTACCACTTGGAGGGGGTGGCATGCCGGGCTATGCAGCTGATGATGAAGAAACAATGAGGCTACGAGCTGAGAGAGGAGCCGCGGCTGGAGGATGGAG TCCACAAATAAGCAAGAAGAGGGCACTTGAAGAAGCCTTTGGAACCATGTGGGTTTGTTGAGTCACGTTTTGGTGAGAGGCATGATGTGCTTATTTAAGT TGGTGTTTAGATATTTGAGGGCATGCAAATTCTGTTGTCACTTAAGCCATTCACACTCTGTTGTAAATGGTGTGGAATGTAATATATTTTACTGGTTGAT TGCGACCCCAGTTGAACTACTGCTATGCCTATGGTTCAAATCCTATAGTTGTCACTCTATGAAGAGGAACAGTTACCAGGTCAAATACCGAACAAAAAAA TATTAAAGGCATGCAAAATCCTTTTGACAGAAGGCATTCATGTGAATGGATATCCTGTTGTAAATGGTATAGAATGTAAAATCAACTTCTTTTTTACAAG GGTATACAGTGCATGAAACTTTAT
• Tissue: pods
• Gene name: LI_gene_138342;
• Additional information: details;

Expression of Ll_transcript_335156

FPKM

• PAB: 0.6
• PNAB: 1.3
• PS1: 0.7
• PS2: 1.4
• PS3: 1.3
• PW1: 1.1
• PW2: 0.8
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_335156

• Blastp: CDK-activating kinase assembly factor MAT1 from Xenopus with 28.34% of identity
• Blastx: CDK-activating kinase assembly factor MAT1 from Mus with 50% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (380053)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445208.1)
• Pfam: CDK-activating kinase assembly factor MAT1 (PF06391.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;