Id Trinity | TRINITY_DN44796_c1_g3_i2 |
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Name Transcript | Ll_transcript_335105 |
Sequence | CTCACTCACTTTTTCTATTTAAGATATATCCTCCTCAATCAATTGCTATGTTTTACAATGAATCAAAAAGAGTTTTTCATAATTTACTATTTTTTTGCTT CTCTTGTATTTTGTGTTACCAATCATTGTGAGAATGCTCAAGTCCAAGATTTTGACAGAAACTATATTGTGAAGAATGGCCAAGATCATTTTGCCAAACT TTATAATGGAGATGAAATCCGACTTTCATTGGATCAGAAATCAGGATCTGGTATCACATCGAGGACGAAATACACTGCAGGATTGTTTGAAATGTTGATG AAGTTGCCAGATCATGCTTCTCCTGGAGTTATTTCTAGCTTTCATTTAACCTCAAACACCGTAAATTCAGATGCAAAACATGATAAGATTAGCTTTGAGT TTTTGGGTACTGATAGACGCCCCACATTACAAACAACAGTATATGCTGGTGCTACTGGTGGTAAAGGAGAAGAAGTAAAACTTTGGTTTGATCCCACACA AGACTTCCACAAATATGGAATTAGGTGGAACAAAAATATAATACAGTTCTTGGTGGACCACAAGCCTGTTAGAGTGTTACAGCAAAAGAATGCTGGAACA TATCCAAAGGGCTCAATGGCTGTAGAAGCAACCATAAGTAAGGGATATGATAAGAAAGTTATTTGGTCTAGAGGTCCATTCTTATTGCACTTGCGAGGCT TTAGCATTTCACCTTCACCATTGGCAATAATGGGTCATTTCAACATTTCAATGTAGAACACAATCCAAATTTTGGAATTTGACCCAAAATTAGCATGTTA AAAAGGAACTATATGTTGTATCAATAGTGCTCAAATAATCTATTTTTAATAAATGCCAAATAAAGTGATTTGTTGGTGGCTTACTCTTATTTTGCTATAA AATTTTCTTGATACTTTTTATTGTCCATGCAATAAGAATATAAAGTTCTGTAATGCAAC BLAST |
Tissue | pods |
Gene name | LI_gene_138357; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_335105
Blastp | Xyloglucan endotransglucosylase/hydrolase protein 3 from Arabidopsis with 41.84% of identity |
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Blastx | Xyloglucan endotransglucosylase/hydrolase protein 3 from Arabidopsis with 41.84% of identity |
Eggnog | hydrolase family 16(COG2273) |
Kegg | Link to kegg annotations (AT3G25050) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462880.1) |
Pfam | Glycosyl hydrolases family 16 (PF00722.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |