| Id Trinity | TRINITY_DN44796_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_335107 |
| Sequence | CTCACTCACTTTTTCTATTTAAGATATATCCTCCTCAATCAATTGCTATGTTTTACAATGAATCAAAAAGAGTTTTTCATAATTTACTATTTTTTTGCTT CTCTTGTATTTTGTGTTACCAATCATTGTGAGAATGCTCAAGTCCAAGATTTTGACAGAAACTATATTGTGAAGAATGGCCAAGATCATTTTGCCAAACT TTATAATGGAGATGAAATCCGACTTTCATTGGATCAGAAATCAGGATCTGGTATCACATCGAGGACGAAATACACTGCAGGATTGTTTGAAATGTTGATG AAGTTGCCAGATCATGCTTCTCCTGGAGTTATTTCTAGCTTTCATTTAACCTCAAACACCGTAAATTCAGATGCAAAACATGATAAGATTAGCTTTGAGT TTTTGGGTACTGATAGACGCCCCACATTACAAACAACAGTATATGCTGGTGCTACTGGTGGTAAAGGAGAAGAAGTAAAACTTTGGTTTGATCCCACACA AGACTTCCACAAATATGGAATTAGGTGGAACAAAAATATAATACAATTCCTCTTTCAATTCCGCTAACTATTATAGAGTTCTTCAAGCTTCATGACTCGT TTTGGAAGAGGCATTACTTCTGATCTGTGGCGGATGTTATGGTTTACGATGGTTTGGTCAATTTGGACCATGCGAAATGACGTTATTTTTGTAGAGAAGA CTCCTAGTTATGTTCATCTTTTGGATTCAGTGCAAACTAAGTCGTGGATTTGGTTCACCAATGCTATTAATTTGTCTTCTTTATCTTTTGTAAATTGGTG TATGGATCCGAAAGAGTGTATTAGAATCAGCTCTAAAAAGATCATTACTTGATCTTTCCTTGTATTGGGTGGGCACCCCTTGTGCTCAGTTTAATAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_138357; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_335107
| Blastp | Xyloglucan endotransglucosylase/hydrolase protein 2 from Arabidopsis with 43.05% of identity |
|---|---|
| Blastx | Xyloglucan endotransglucosylase/hydrolase protein 2 from Arabidopsis with 43.45% of identity |
| Eggnog | hydrolase family 16(COG2273) |
| Kegg | Link to kegg annotations (AT4G13090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463146.1) |
| Pfam | Glycosyl hydrolases family 16 (PF00722.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |