Ll_transcript_316987

• Id Trinity: TRINITY_DN44809_c0_g1_i10
• Name Transcript: Ll_transcript_316987
• Sequence: AAAAAATGAGTTGAATGTGTCTCAGATTCATGAAATACTCACAATTATTAAACTTCAATTTTGAACAAATCTGTTATGCAATTTCATCATCAACAACAAT AAAAAAACCAATCAATGGGTTATAGATGTGTTCAATGTAGCTTTCCCATCAAATCACTTTATGTTCAGTATTCTCCTGGCAACATTCGCCTCATGAAATG TGAGAATTGCAAGGCTGTTGCAGATGAATACATTGAGTGTGAAATTATGGTGTTTATTACTACCCCTTTATGTCATTGATTCCAAAGTTTAAACCTTTTT TTATTTTTATTGAAATTTTTTTTGAGGAAATTTTTTCCCTGTTTTCTTATCTTTGCACCTTTGCAGATTCTTGTAATAGATTTAATACTTCACAAGCCCA AGGCATATAGACATCTTCTCTACAATGTCATCAATCAACAAACCTTGATGTTTCAGGGGCTATTCTGGAAATTGGCTTTTGTTTTTCTTCTTTTTGATAG TTGTATCCATTTTATGTCGATATTATTATTTTTAATGCTTTAGGAGTTTAGTTTTAAATTGTTGTTCTTGGTTTACAAGACCATATATGAGGGCCTTACA ACTTGTTGAAGATAAGTGTTTGGTTTTGGAAAGCAGCAAGAGCAAATTGGGTTCATCATCAATGAGCTTCTCTTCATTAATGTCAACATGTTGGAAGGTT CATCTATCTACAAATAGTTTATGATGTTTGGTTTGGTTCATTCTAATTCTGCTGAATGTTTTATGGTTTTCATGGGCAGATATTGATTGATGTGTTCTTT GGGAACTTTATGTTCCTTTTAACTTTCTTCATTATGGCTAAGATATTTCTCCATACACCAATCAGCATCTCCAGGTATATAATCTGCTTTATCAGGCATG CAGCATGCCATTCTAGTCATGGAAAAAGGAAGAATTAGTTATAATTTACCATTTTGAAGAAATATTGCGTGACAAGGTTGTCCATTAGAAATCTTGTGAA TCTGCTGTTTTGAGTTAAAGAAGGGATTTGCTTCTCTGTTTTAATTTTGTTAAGTACAAAACAGGATATTAATATATGAAAGTTGCTTCTTCTGGTGTAT CATAAATGAGTTATGGATCCACTGGCAAAGAGTGAATAGAGGGTCTGTAGTTATGGGAGTTTTGATCTTATCAAATGATATTATTCAGATGCACAAGTGA CAATATAGCATAGCAAAGATGATTATTGGTAGCATTAGGAATCCAAGAATGAGTGAAATGAGTCCGGCATCAAGAAGGAATTGGCAAGGTGAAGAACATA TTAGTGGATTGACTTAATGTCTTCATATTTTGGGTCGATTTGTGGTGTCAAACTCACTAATGTATTTGTAATTCTTTGTGTATCCCAATGGATGTTGAAC TCCCAAGTTCTTGATCTCTTCGCCCCCAATAGTTTGAAAATTGGTTTAGTAATTGGGCAATTGGCAACAAAAGATTCACTGTCTGTAGTTAAGTCTTAGT CTTGAAACCTTGTAATTTAAGTGATAGAAAATTACGAGATATGATAGTGTATATATACTTATTTCTATCAATTTTAAGTTTTTAGAACCTTCAATAAGTT GGGTTTTTTAAGCTAAATATTTCTATCCAGATTAAGTTTGTGTTTCAAGACCATCGTGATCGCTCCAGCTTAAATGTACTCTCATCTATGCAGGTGCAGT GACCTCTTGCTTGCACTCATGATTTCTGGTTACTTCAAGATTTTTCTTATTGCAATGACGGTCTGGGAATTTCCATCTTCTGTGATCTTTATCATTGAGT TATTCTGTTTATCATCTAATGCAGTGGCATTGAAAGTGATGACTGAATCAACGATGAGTCGATGTGTCTGTGCCTGCTTCAGTGCATATGCTATAAAGCT TTTTGCAACTCAGATTCTGGATCTCACATTTTGGGGGAAATTAATACAAGGCTGGAGTCAAACACCCTCCTCATTCTCTTTAAAGCCATCCTGATTTTGT CTTTGTTTTTTCATGCTATTTTCTATTGGTGGCAGAGAGAATTTAGAAGTAAATATATGATCCAAGACATTCCTTTTTATTTATTTTAGATTTGATATAT GAAGCACCTTTATTAGTGTGCTTCTTTCCAAAAAATTTTGCTTATATTACACACACCTGAAGGCTGAAGTTTATTCTATTTCTACTGTTTAACCCTTTAA TGATCACTCATTTTTATGGTGTTTTTGGTTTAACCAAATTGTACTCTCGTCTTGAGAAATGAACTAATTCCTTTTAGGACGTGGAAATGTACATCTCAAT AAGTATCATAGAAATTGAAC
• Tissue: pods
• Gene name: LI_gene_138385;
• Additional information: details;

Expression of Ll_transcript_316987

FPKM

• PAB: 0.1
• PNAB: 0.9
• PS1: 0
• PS2: 1
• PS3: 0.5
• PW1: 0.3
• PW2: 0
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_316987

• Blastp: Protein arv1 homolog from Dictyostelium with 34.43% of identity
• Blastx: Protein arv1 from Schizosaccharomyces with 30% of identity
• Eggnog: ARV1 homolog (S. cerevisiae)(COG5254)
• Kegg: Link to kegg annotations (DDB_G0290221)
• CantataDB: Link to cantataDB annotations (CNT0001977)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454676.1)
• Pfam: Arv1-like family (PF04161.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;