| Id Trinity | TRINITY_DN44809_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_316982 |
| Sequence | AAAAAATGAGTTGAATGTGTCTCAGATTCATGAAATACTCACAATTATTAAACTTCAATTTTGAACAAATCTGTTATGCAATTTCATCATCAACAACAAT AAAAAAACCAATCAATGGGTTATAGATGTGTTCAATGTAGCTTTCCCATCAAATCACTTTATGTTCAGTATTCTCCTGGCAACATTCGCCTCATGAAATG TGTAATCATTTTCTTATTTTTCATTTCAATTAACCAAATTTAGTGAATTTGGTTTTTATTTTATAACCTAATTGCTTCATGTTTCGTGTAGGAGAATTGC AAGGCTGTTGCAGATGAATACATTGAGTGTGAAATTATGGTGTTTATTACTACCCCTTTATGTCATTGATTCCAAAGTTTAAACCTTTTTTTATTTTTAT TGAAATTTTTTTTGAGGAAATTTTTTCCCTGTTTTCTTATCTTTGCACCTTTGCAGATTCTTGTAATAGATTTAATACTTCACAAGCCCAAGGCATATAG ACATCTTCTCTACAATGTCATCAATCAACAAACCTTGATGTTTCAGGGGCTATTCTGGAAATTGGCTTTTGTTTTTCTTCTTTTTGATAGTTGTATCCAT TTTATGTCGATATTATTATTTTTAATGCTTTAGGAGTTTAGTTTTAAATTGTTGTTCTTGGTTTACAAGACCATATATGAGGGCCTTACAACTTGTTGAA GATAAGTGTTTGGTTTTGGAAAGCAGCAAGAGCAAATTGGGTTCATCATCAATGAGCTTCTCTTCATTAATGTCAACATGTTGGAAGGTTCATCTATCTA CAAATAGTTTATGATGTTTGGTTTGGTTCATTCTAATTCTGCTGAATGTTTTATGGTTTTCATGGGCAGATATTGATTGATGTGTTCTTTGGGAACTTTA TGTTCCTTTTAACTTTCTTCATTATGGCTAAGATATTTCTCCATACACCAATCAGCATCTCCAGGTATATAATCTGCTTTATCAGGCATGCAGCATGCCA TTCTAGTCATGGAAAAAGGAAGAATTAGTTATAATTTACCATTTTGAAGAAATATTGCGTGACAAGGTTGTCCATTAGAAATCTTGTGAATCTGCTGTTT TGAGTTAAAGAAGGGATTTGCTTCTCTGTTTTAATTTTGTTAAGTACAAAACAGGATATTAATATATGAAAGTTGCTTCTTCTGGTGTATCATAAATGAG TTATGGATCCACTGGCAAAGAGTGAATAGAGGGTCTGTAGTTATGGGAGTTTTGATCTTATCAAATGATATTATTCAGATGCACAAGTGACAATATAGCA TAGCAAAGATGATTATTGGTAGCATTAGGAATCCAAGAATGAGTGAAATGAGTCCGGCATCAAGAAGGAATTGGCAAGGTGAAGAACATATTAGTGGATT GACTTAATGTCTTCATATTTTGGGTCGATTTGTGGTGTCAAACTCACTAATGTATTTGTAATTCTTTGTGTATCCCAATGGATGTTGAACTCCCAAGTTC TTGATCTCTTCGCCCCCAATAGTTTGAAAATTGGTTTAGTAATTGGGCAATTGGCAACAAAAGATTCACTGTCTGTAGTTAAGTCTTAGTCTTGAAACCT TGTAATTTAAGTGATAGAAAATTACGAGATATGATAGTGTATATATACTTATTTCTATCAATTTTAAGTTTTTAGAACCTTCAATAAGTTGGGTTTTTTA AGCTAAATATTTCTATCCAGATTAAGTTTGTGTTTCAAGACCATCGTGATCGCTCCAGCTTAAATGTACTCTCATCTATGCAGGTGCAGTGACCTCTTGC TTGCACTCATGATTTCTGGTTACTTCAAGATTTTTCTTATTGCAATGACGGTCTGGGAATTTCCATCTTCTGTGATCTTTATCATTGAGTTATTCTGTTT ATCATCTAATGCAGTGGCATTGAAAGTGATGACTGAATCAACGATGAGTCGATGTGTCTGTGCCTGCTTCAGTGCATATGCTATAAAGCTTTTTGCAACT CAGATTCTGGATCTCACATTTTGGGGGAAATTAATACAAGGCTGGAGTCAAACACCCTCCTCATTCTCTTTAAAGCCATCCTGATTTTGTCTTTGTTTTT TCATGCTATTTTCTATTGGTGGCAGAGAGAATTTAGAAGTAAATATATGATCCAAGACATTCCTTTTTATTTATTTTAGATTTGATATATGAAGCACCTT TATTAGTGTGCTTCTTTCCAAAAAATTTTGCTTATATTACACACACCTGAAGGCTGAAGTTTATTCTATTTCTACTGTTTAACCCTTTAATGATCACTCA TTTTTATGGTGTTTTTGGTTTAACCAAATTGTACTCTCGTCTTGAGAAATGAACTAATTCCTTTTAGGACGTGGAAATGTACATCTCAATAAGTATCATA GAAATTGAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_138385; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_316982
| Blastp | Protein arv1 homolog from Dictyostelium with 34.43% of identity |
|---|---|
| Blastx | - |
| Eggnog | ARV1 homolog (S. cerevisiae)(COG5254) |
| Kegg | Link to kegg annotations (DDB_G0290221) |
| CantataDB | Link to cantataDB annotations (CNT0001977) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454676.1) |
| Pfam | Arv1-like family (PF04161.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |