| Id Trinity | TRINITY_DN44810_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_317154 |
| Sequence | GAAGAATTGAAGCCCATTGTGAACCCAAAGAGAACTATTATTAGCACTATATTATTTCTCTCTCTTCATTCTTTCTTCTCTTCACGATCTCCGATCACCA CCAACTTCCTTTTCTAACAGGTATCTCTTTTCTTCTATCTAATTCTCTTTACCTTAATTTCATTCTTTCTTTTTCCCTTTTTTTTCAATTTTATTTTTCA ATTTTTGCAATTTGAATCTGTAAATTTTGGATTGATTCGTTGATCATCTTCATACCCATCTTTTTAAATCCAATTGGGTTTTTGTTTTCAATTTCAAAAT TAAATCTTGTTAATTAGATGTTGAATTATGATCAAACTAAAAATAAGGGTTTGTTTGGTTTTTTTAATGTGTTGATTAGAGTTGTTTGTGAAAACTTTGC TACATTCATTGCTCAACTTTATAGTTCATACCCGCGTTTTATAATCCAATTAGGTTTTGTTTTTTATTTCAAAATTGAATCTTGTTAAGTTGATATTGAT TGGGTGATTTGAGCAAAGAAAAGTGAAAGTGATGTTTGGTTAATTTAGATCTTGTTTGTGAAGAGAAAAAGGAAAAAAAGATGTCAGGGCAAACACAGCG TTTGAATGTGGTCCCCACAGTGACGGTGTTAGGAATGGTGAAAGCTCGGCTGGTAGGAGCGACGAGAGGGCACGCTCTTCTGAAGAAGAAGAGTGATGCT CTTACTGTACAATTCAGGCAGATCCTGAAGAAGATTGTGACAACAAAGGAATCAATGGGTGACATTATGAAAACCTCTTCATTTGCGTTAACCGAGGCTA AGTATGTTGCAGGTGACAATATTAAGCATGTTGTTCTTGAGAATGTTCGAGAAGCTTCCCTCAGGGTTCGCTCTCGCCAGGAGAATGTTGCCGGTGTCAA GCTCCCTAAGTTCGAGTACACCAGCGATGGTGAGGTCTCTAAGAATGACCTCACCGGATTGGCCCGAGGTGGGCAGCAGGTGCAGCAGTGTCGCCTTGCT AATATTAAGGCAATCGAGGTTCTCGTTGAGCTTGCTTCGCTTCAGACATCGTTCCTTACGCTTGATGATGCTATCAAGACGACGAACCGCAGAGTGAATG CTCTTGAGAATGTGGTTAAGCCGAGGTTGGAGAATACAATTAGTTATATCAAGGGAGAGTTGGATGAGCTAGAAAGAGAGGATTTCTTTAGGTTGAAGAA GATTCAAGGGTTTAAGAAGAGGGAAATTGAGAAGCAGATGCAGAACGCCAAGCTATTTGCTGAAGATCAGGTTGCTGAGAAGCTTTCGTTGCAGAAAGGG ATTTCTGTGAACGCTGCTCATAACTTGTTGTCTGCCACAACCGAGAGAGACGAGGATATCATTTTCTGAATATAAAGAGACTGTCGGGGTTTGTTTGTGC TTGGTTTTCAATGATCTTGATGTGTTGCTGCTTCATCAGACTTCTCTGCAATTGTTTTATAGATGACAGTGCTCTGTACCATGAATAAAGGCGCTTACTA TGTTTTAATTTATTTCTCTGTTATTCAGAGGCATTGAGACAATCATCTTTTCTTATGTTATGAAAATTGAACTTATTGTTTTACATGTCAATTCAACTTA TGGGATATATGCAAATGGTAATTTATATTTAGGACTTTGTTCAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_138388; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_317154
| Blastp | V-type proton ATPase subunit D from Arabidopsis with 79.77% of identity |
|---|---|
| Blastx | V-type proton ATPase subunit D from Arabidopsis with 80% of identity |
| Eggnog | Produces ATP from ADP in the presence of a proton gradient across the membrane (By similarity)(COG1394) |
| Kegg | Link to kegg annotations (AT3G58730) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455431.1) |
| Pfam | ATP synthase subunit D (PF01813.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |