Ll_transcript_317226

• Id Trinity: TRINITY_DN44837_c0_g1_i1
• Name Transcript: Ll_transcript_317226
• Sequence: TGCAGATGCCTTACAAAATGGAGATGTTACTGAGATTCTGGATGATGGAGAAGTGGCTGAAGAAAACGATGAAGAGGGTGGATGGGAGATGGAGGATTTA GAGCTGCCCCCAGAAGCTGAGACCCCAAAAGTTTCTATCAGTTCACGTTCTTCAGTTTTTGTGCCTCCAACACCTGGCATTCCGGTTAGCCAGATATGGA TTCAGAGGTCATCACTTGCAGCTGATCATGCAGCCGCTGGCAATTTTGATACTGCAATGCGGTTACTTAACCGGCAACTTGGGATCAGAAACTTTGCCCC CTTGAAATCCATGTTTCTTGACCTTAACACTGGAAGTCATTCCTATCTGCTTGCATTTTCGTTTGCTCCAGAAATAACACTTGCAGTTGAAAGAGGATGG ACCGAGTCATCTAGTCCAAACGTGAGAAGCTCACCTGCACTTCCGTTCAAATTGTCTCAGTTGGATGAAAAGCTTAAAGCTGGTTACAAGTTAACTACTG CTGGGAAATTCACTGAAGCTCTTCGGACATTTGTCAATATTCTTCATACAATTCCATTGACTGTTGTTGACTCAAGGAGGGAAGTGGATGAAGTGAAGGA ATTGATTATCATAGTCAAAGAGTATGTTTTAGGTCTCCAGATTGAGTTGCAGAGGAGGGAAATCAAGGACAACCCTGCACGGCAACAGGAGCTTGCAGCA TATTTCACTCACTGCAACCTTCAACTACCACACTTGAGGTTAGCTCTGCTCAATGCAATGGTTGTATGCTTCAAGGAAAAGAACCTCGCCACAGCTTATA ATTTCGCCAGGAGGCTACTTGAGACAAACCCTACCATTGAAATCCAAGTAAAGAGAGCGAGGCAAGTGGTGGCAGCTGCAGAAAAGAATATGAATGATGC CACGCAGTTGAACTATGATTACCGAAACCCATTTGTGATTTGTGGTGCAACATATGTCCCAATCTATCGAGGACAGAAGGATGTCTCTTGCCCATATTGT ACTTCTCGATTCGTGCCAGGCCATGAAGGGCAACTATGTACTGTGTGTGATCTTGCAGTGGTAGGGGCAGATGCTTCTGGGTTGCTCTGTTCACCTTCCC AGTTACGTTGATTGAGCTGTGGACCAGGAGTTGATTGAGCGGTGGACCAGGAGTTTTCTCGAACTTTGTTTCAGATCAATTTTATGCAGCAGATGGAACA TTATTGATCCATTAATATTTCATGGTAACTAGAAAATTTTGCTTTTCCTTTTATTTTGTCGAAAATGATTTTCAATGTAATAAATAAACTTTATGTTTTA AGGGTGTTTGTTTCATGCAAAGAAAGCAAGAGGGTGTAGTTATTAAGATCAAATGTTTGTTTTTATGGTGTGCATACTTATGACTTTGGCACATCTTGTT TGGCAATGCATTTCCTTATAGGTTCTATGTCAGTAAGTTATTTTGTGTAATCTTTCATGTTGCATTATGATTAGAAATGGTTACACTTGAGCAGTATCAT CAAATCATGGTTAGTCATTTAGCTGGACAAGCTGCAGTGGTTTGAATTATGCTGGTGGAGCTTTTTCCCTCAACTGCACCATACCCTGGCTAAGGTTATT TGCATCTGCATTCCTCAAACTCCACTAAGTCGGAGCCTTTTCCAACTTCTCCGAGGACTTTACTGGTGTTATTTTGGCAGGGAACCTATTATTAGTCTGT TTTTATTAATCACAAAAACTCTTCCATGTCATTTAGTTCTGGTATGAGTCTTTACAACTTTAAAGCATTTAGTTTATTCATTATGATGATAAATTAAGTG CTAATGTATCATATCATTATTGACCATGCCAATAACTTTTTAAGATATGTAATTGGTGTTTGTTTTTTCTACTATTAAAAGTATCCCCTCACTTTTTTTA AT
• Tissue: pods
• Gene name: LI_gene_138432;
• Additional information: details;

Expression of Ll_transcript_317226

FPKM

• PAB: 6.4
• PNAB: 46
• PS1: 32.3
• PS2: 31.5
• PS3: 37.8
• PW1: 24.6
• PW2: 29.2
• PW3: 22.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_317226

• Blastp: Coatomer subunit alpha-1 from Arabidopsis with 73.44% of identity
• Blastx: Coatomer subunit alpha-1 from Arabidopsis with 73.44% of identity
• Eggnog: Coatomer protein complex subunit alpha(ENOG410XPZS)
• Kegg: Link to kegg annotations (AT1G62020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449811.1)
• Pfam: Coatomer (COPI) alpha subunit C-terminus (PF06957.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;