| Id Trinity | TRINITY_DN44837_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_317227 |
| Sequence | TGCAGATGCCTTACAAAATGGAGATGTTACTGAGATTCTGGATGATGGAGAAGTAGCTGAAGAAAATGATGAAGAGGGTGGATGGGAGATGGAGGATTTA GAGCTGCCCCCAGAGGTGGACACCCCAAAAGTTTCTATCAGTTCACGTTCTTCAGTTTTTGTGCCCCCAACTCCTGGCATTCCAGTTAGCCAGATATGGA CCCAGAGGTCATCTCTTGCTGCTGATCATGCAGCTGCTGGCAATTTTGATACCGCGATGCGGTTACTTAACCGGCAACTTGGGATAAAAAACTTTGCCCC CTTGAAGTCCATATTTCTTGATCTTAACACTGGCAGTCATTCACATTTGCCTGCATTTTCGTCTGCTCCAGAAATATCACTTGCAATTGAAAGAGGGTGG ACTGAGTCATCTACTCCAAACGTAAGAGGCTCACCTGCGCTTCCATTAAAATTGTCTCAATTAGATGAAAAACTTAAAACTGGTTACAAGTTAACTACTG CCGGGAAATTCACTGAGGCTCTTCGGACATTTGTCAATATTCTTCATACAATTCCATTGGTTGTTGTTGAGTCAAGGAGAGAAGTGGATGAAGTGAAGGA ATTGGTTGTCATAGTCAAAGAGTATGTTTTGGGTCTCCAGATCGAGTTACAGAAGAGGGAAATCAAGGACAACCCTGCACGGCAACAGGAGCTTGCAGCA TATTTCACTCACTGCAACCTTCAACTACCACACTTGAGGCTAGCTCTGCTCAATGCAATGGTTATATGCTTCAAGGAAAAGAACCTTGCTACAGCTTATA ACTTCGCCAGGAGGCTACTAGAGACAAACCCCACCATTGAAATCCAAGCTAAGAAAGCGAGGCAAGTGTTGGCTGCTGCAGAAAAGAATATGAATGATGC CGCACAATTGAACTATGATTATCGAAACCCGTTTGTAGTTTGTGGTGCGACTTATGTTCCAATCTATCGAGGACAGAAGGATGTCTCTTGCCCATATTGT ACTTCTCGATTTGTGCCAAGCCATGAGGGGCAACTATGCACTGTGTGTGATCTTGCAGTAGTTGGGGCAGATGCTTCTGGATTGCTCTGTTCACCTGCCC AGATTCGTTGATATAGCCGCATGGACCCGTAGTTTTGCTCAAATTTTGTTTCAGGTCAATTTTATGCAGCAGATAGAACACTATTGATCAATTAATATTT CATGGCGGGCTCTAATTTTTTTTTGCTTTCCCTTTTATTCAGTCAAAAATGTTTTTCATTGTCATAAATCAACTTTATATTTTGAGGGTTGCTTGTTTCA TACAAAAGTAAAATGTTGTACTTACTATATCAAATGCTTATTTTATGTTGTGCAGACTTAAATTCTGGTATTTTTATTTGGCAAAATACATTGGTACTTC AATACTCAACTGCAATAGTGATTAATGCTTCTCTGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_138432; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_317227
| Blastp | Coatomer subunit alpha-1 from Arabidopsis with 73.17% of identity |
|---|---|
| Blastx | Coatomer subunit alpha-1 from Arabidopsis with 73.17% of identity |
| Eggnog | Coatomer protein complex subunit alpha(ENOG410XPZS) |
| Kegg | Link to kegg annotations (AT1G62020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460729.1) |
| Pfam | Coatomer (COPI) alpha subunit C-terminus (PF06957.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |