Ll_transcript_317402

• Id Trinity: TRINITY_DN44862_c0_g1_i1
• Name Transcript: Ll_transcript_317402
• Sequence: AAAAGCTTCTCCCCTCACCCATTTCAATGGGTCCCTTCCATTCATTAGAAAAATTGTTACTGTAATTCAAGTGATGAATATGGTTGAGTTCTGTTGTGGT GTGGTAGGAGAAACTGAATCTCAAACTCCAATTGAACCAACCTCACGGCGTCGCAGCCGTGACGTCCTCCCTTTCAAATACATAGCTGACGTGGCACCGT CGCAGCCTGATTCTTCTCGTAAACGGCCAAAGCTCGACCTCTCCGATTGCCAAAACGCCGTGGAAAACCGCAAACCTGTTAACGACGAAGACAAGCAAGC TAAGGAAGAAGGAGATTCAAACGTAAACGACAACGTCGTTTCGGGAACGGAGGTGATTGAACAGTTACCTCCTCCAAAGTTTGGAATAACATCTGTTTGT GGTAGAAGAAGAGATATGGAAGATTCCGTTTCTGTTCATCCTTTCTTCTCTCAACAAGAGTTCCATTACTTTGCTGTCTTCGATGGACACGGTTGCTCAC ATGTAGCGACTATGTGTAAGGAGAGGCTTCACCAGATTCTGAACGAAGAGATTCGTGAAGCACGAGAGAAGAATATGGAATTGGAATGGAAAAAGGTGAT GGAAAAAGGTTTTGGTCTCATGGACGATGAGGTTCAGAAGCGGAGCCATAGCGATAACCAAAGCTTGAGATGCAGGTGTGAGCTTCAGACTCCGCACTGC GATGCCGTCGGATCCACCGCCGTCGTCGTCGTTGTGACACCGGAGAAAATCATCGTCTCCAACTGCGGTGATTCGCGCGCTGTTCTTTGCCGTAAAGGCG TCGCTATCCCTCTCTCCTCCGATCACAAGGTTCTTTTCGCTTTGTTTTTTTTAATATCTTTTTTATACGTGAGACGCGTGTCGTGCACGAGTTCTAACAG TTACGTGATTGATTTTTTGCAGCCAGACCGGCCTGACGAGATGAACCGGGTTGAATCAGCTGGAGGGCGCGTGATTAATTGGGATGTCCCTAGAGTTCTT GGAGTCTTATCCATGTCTAGAGCCATAGGTGAGTAACTGCACCTTAAAAGACTAACAAGTATTACTATTAGGAATTAGGAATCCAACTTTTAACTCTGAT TATAGCGATGATACAGTAGGCCTTAAACCATTAGACCAAAGGTGGTTCTAAAATTTAACCCTATTAATTTTTTTGTTGTTGTTTGTGTTTTCAGGTGACA ATTATCTGAAGCCTTATGTGATATCTGAACCGGAGGTGACAGTGACCAAACGGAGTAACGATGATGAGTGTTTGATACTGGCGAGTGATGGTTTGTGGGA TGTGGTATCAAATGAGACTGCGTGCGGGGTGGTGAGGATGTGCCTGAAGGCGGAGAGGCCGCCATTGCCACCGGGGTCTCCGGGGACGGTGGATGGTTCA GACAGGGCGTGCTCTGATGCGTCCATTTTGCTTACCAAGTTGGCATTGGCAAGGCATAGTTCGGATAATGTGAGCGTGGTTGTGGTTGATTTGAAAAGAG ATAGACAATTCAGTTGCAGAAACGTCACCAACAATAACAACAACAACGTTAATTAATTTAACGTTTGAAATAAAACAAAAAACTAGTGAATGAATTGTCT TTTTTTAAACCGAAAAATGGTGGCATTGGCCAGCTTCCGTTTTTTTCTACTTGGTTAAGAAAAATGGATCAGGGTTTAGCCATCTTTAGCTATTGTAATG GGAATGGAAGAAAAAATTATAGGAAATTTTAGTCTAGGAGGAACTTGTGTCAATAAAGGATTAAAATATACCCAGTTGACACACTTTCTTTGTCCATAAT GGAATCTATATATTGGATTTTGCTTTGGTTCAGCACTTCTGATTCTGATCTTTCGCTTTTTCTTTCAACTTGAATTACGTTAGGTGTGGTTGTTCATGTA CAACGAATGTTATAACGTAATTTGTGATTCGTGGGAATATCGAAGACTGAAAAGTTTGTACTCGTTGTTCAATCAATTGAACATGGTTTTAAATTCCCTC AAACATTCCTCATGCATGAATATAATCAATCACAGACTCATTTGCTTTCAAATTTTCCTCATCGTTTCTCAAAAGTTACTATGGTATGAGACGTAGGACA ATGTTCAATTCTCCTAACTCGATTGATTCAAGCTTCATTTTGAGTAGAACAACCGAGATTTGATGTCACTAATTGGATAATGAATCAAAAACAACAATAT TTAATTTTTT
• Tissue: pods
• Gene name: LI_gene_138479;
• Additional information: details;

Expression of Ll_transcript_317402

FPKM

• PAB: 17.4
• PNAB: 2
• PS1: 3.5
• PS2: 4.1
• PS3: 6.2
• PW1: 1.3
• PW2: 2.3
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_317402

• Blastp: Protein phosphatase 2C 37 from Arabidopsis with 49.11% of identity
• Blastx: Protein phosphatase 2C 37 from Arabidopsis with 49.11% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT3G11410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439444.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;