Ll_transcript_317403

• Id Trinity: TRINITY_DN44862_c0_g1_i2
• Name Transcript: Ll_transcript_317403
• Sequence: AAAAGCTTCTCCCCTCACCCATTTCAATGGGTCCCTTCCATTCATTAGAAAAATTGTTACTGTAATTCAAGTGATGAATATGGTTGAGTTCTGTTGTGGT GTGGTAGGAGAAACTGAATCTCAAACTCCAATTGAACCAACCTCACGGCGTCGCAGCCGTGACGTCCTCCCTTTCAAATACATAGCTGACGTGGCACCGT CGCAGCCTGATTCTTCTCGTAAACGGCCAAAGCTCGACCTCTCCGATTGCCAAAACGCCGTGGAAAACCGCAAACCTGTTAACGACGAAGACAAGCAAGC TAAGGAAGAAGGAGATTCAAACGTAAACGACAACGTCGTTTCGGGAACGGAGGTGATTGAACAGTTACCTCCTCCAAAGTTTGGAATAACATCTGTTTGT GGTAGAAGAAGAGATATGGAAGATTCCGTTTCTGTTCATCCTTTCTTCTCTCAACAAGAGTTCCATTACTTTGCTGTCTTCGATGGACACGGTTGCTCAC ATGTAATTAAATTTTCATTCATATCGTTTATTTGTTTCCACTATTATTTCGTTTTTGTTTCTGATTTTTTATTTTTTATGGGTCTACAGGTAGCGACTAT GTGTAAGGAGAGGCTTCACCAGATTCTGAACGAAGAGATTCGTGAAGCACGAGAGAAGAATATGGAATTGGAATGGAAAAAGGTGATGGAAAAAGGTTTT GGTCTCATGGACGATGAGGTTCAGAAGCGGAGCCATAGCGATAACCAAAGCTTGAGATGCAGGTGTGAGCTTCAGACTCCGCACTGCGATGCCGTCGGAT CCACCGCCGTCGTCGTCGTTGTGACACCGGAGAAAATCATCGTCTCCAACTGCGGTGATTCGCGCGCTGTTCTTTGCCGTAAAGGCGTCGCTATCCCTCT CTCCTCCGATCACAAGCCAGACCGGCCTGACGAGATGAACCGGGTTGAATCAGCTGGAGGGCGCGTGATTAATTGGGATGTCCCTAGAGTTCTTGGAGTC TTATCCATGTCTAGAGCCATAGGTGACAATTATCTGAAGCCTTATGTGATATCTGAACCGGAGGTGACAGTGACCAAACGGAGTAACGATGATGAGTGTT TGATACTGGCGAGTGATGGTTTGTGGGATGTGGTATCAAATGAGACTGCGTGCGGGGTGGTGAGGATGTGCCTGAAGGCGGAGAGGCCGCCATTGCCACC GGGGTCTCCGGGGACGGTGGATGGTTCAGACAGGGCGTGCTCTGATGCGTCCATTTTGCTTACCAAGTTGGCATTGGCAAGGCATAGTTCGGATAATGTG AGCGTGGTTGTGGTTGATTTGAAAAGAGATAGACAATTCAGTTGCAGAAACGTCACCAACAATAACAACAACAACGTTAATTAATTTAACGTTTGAAATA AAACAAAAAACTAGTGAATGAATTGTCTTTTTTTAAACCGAAAAATGGTGGCATTGGCCAGCTTCCGTTTTTTTCTACTTGGTTAAGAAAAATGGATCAG GGTTTAGCCATCTTTAGCTATTGTAATGGGAATGGAAGAAAAAATTATAGGAAATTTTAGTCTAGGAGGAACTTGTGTCAATAAAGGATTAAAATATACC CAGTTGACACACTTTCTTTGTCCATAATGGAATCTATATATTGGATTTTGCTTTGGTTCAGCACTTCTGATTCTGATCTTTCGCTTTTTCTTTCAACTTG AATTACGTTAGGTGTGGTTGTTCATGTACAACGAATGTTATAACGTAATTTGTGATTCGTGGGAATATCGAAGACTGAAAAGTTTGTACTCGTTGTTCAA TCAATTGAACATGGTTTTAAATTCCCTCAAACATTCCTCATGCATGAATATAATCAATCACAGACTCATTTGCTTTCAAATTTTCCTCATCGTTTCTCAA AAGTTACTATGGTATGAGACGTAGGACAATGTTCAATTCTCCTAACTCGATTGATTCAAGCTTCATTTTGAGTAGAACAACCGAGATTTGATGTCACTAA TTGGATAATGAATCAAAAACAACAATATTTAATTTTTT
• Tissue: pods
• Gene name: LI_gene_138479;
• Additional information: details;

Expression of Ll_transcript_317403

FPKM

• PAB: 7.4
• PNAB: 1
• PS1: 1.3
• PS2: 1.3
• PS3: 3.5
• PW1: 0.5
• PW2: 1.1
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_317403

• Blastp: Protein phosphatase 2C 3 from Arabidopsis with 52.65% of identity
• Blastx: Protein phosphatase 2C 37 from Arabidopsis with 52.33% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT1G07430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439444.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;