| Id Trinity | TRINITY_DN44865_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_317005 |
| Sequence | TTTTGAACTTCCAATTGATAAATTCTATCAGTGTAAATAATATATTTTTTGTATCTACTTGATAACCAGCGCAAACTCTTGTTTCAAAATGTGTTTCTCT TGAACCTTAGGATGGTATTCAAGCAAATCTCGTTAATCTTATGTTGTTACCTGATTATTATTTTGAGTAAATTTGTTTGTATTTCATCCTGTGTGCACCC TACTTGCTGAAATGATGGAATATATACCAATATATACTTCCGTACTTTGGCCACTTTTAAATTATGGAATCATTTCGATCATGTTATGAGCTTTTGGTTC TCTATAAATCTAACAAATGGAAGTGTAAAAGTGTAGGTATGTTGTTATTTTCCTCAAGGAACATGGCAAGGAAGTATATAATGAAGTTCGTGCAGCGTAC ATTGATACAATGAACAAGGTTCTTAGTGCACATTTCCGTGCCTATATACAAGCATTGGAGAAACTACAGATGGATATAGCAACATCTGATGATTTAATTG GTGTAGAGACAAGAAGCAGTGGTCTATTTATTAGAGCGAGGGAACCACTGAAGAATCGATCTGCAGTATTTGCTCTGGGGGATAGGATTAATATATTAAA GGAAATTGATGAACCAGCATTGATTCCTCATATAGCTGAAGCTAGCTCCAACAAATATCCATATGAGGTCCTATTCAGGAGCTTGCAGAAGCTTCTCATG GATACTGCTACTTCAGAATATAATTTCTGTGAAGATTTCTTTGGAGAACAATCTATATTTTATGAAATCTTTTCAGGTCCATTTGGTGTCATTGATGAGC ACTTCAATTTAATACTTCCAAATTGCTATGATGCTATAGGCCTCATGCTTATGATTCGCATAATACACCAGCACCAGCTCATCATGTCTCGTAGGCGGAT TCCTTGCTTGGACTCTTACTTAGACAAGGTCAATATTTCCCTATGGCCTCGATTTAAAATGGTGTTTGACATGCACCTCAGCAGCCTGCGTAACGCAAGT GTGAAGACGTTATGGGAAGATGATGTTCATCCTCACTATGTTATGAGGCGTTATGCTGAGTTTACTGCTTCCCTTATCCACTTAAATGCTGAGTGTGGAG ATGGCCAGCTTGATTTGAATTTGGAACGACTTAGAATGGCTATTGATGATTTGCTTATCAAGCTCGCAAAGAACTTCCTGAAACCAAAACAACAAACAGT GTTTCTTATAAACAATTATGATATGACAATCTCTGTTCTGAAGGAAGCAGGTCCCGAAGGTGGGAAAATTCTAATGCATTTTGAGGAATTACTGAAGAGC AATACAGCACTATTTGTGGAAGAACTGCTTCAAGAGCATTTCAGCGATTTAATCAAGTTTGTCAAGGCCAAAGCCTCCGAAGACTCAACGTCTAGCCCGG ATAAGCCCATAACTATTGCAGAAGTGGAGCCACTAGTGAAGGATTTTGCAAGTAGGTGGAAGGGTGCAATAGAGCTGATGCACAAAGATGTGATAACTTC TTTCAGCAACTTCTTGTGTGGTATGGAGATATTAAGGGCTGCATTGACTCAGTTGTTGCTTTATTATACCAGACTCTCAGATTGCATAAAGAGGATTGTT GGTGGCTCTGCATTGAACAAGGATCTTGTTTCAATATCTTCAATCATGTATGAAATTAGAAAATACTCTAGGACTTTCTAATTTCTTCAGCTTATATCTA ACTACCAAACTTTACTCCTCATGGTTATATACTCAATTTATAATATGTATCACAAAGTTTCCTTTTGGACCCTCAATGTTGAAGATATTTTTTGTACAAG TTGTTTGCTGCAAAATCCATAAATCCAATCAACGTGTATAAATACATGCCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_138484; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_317005
| Blastp | Vacuolar protein sorting-associated protein 52 A from Arabidopsis with 85.34% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 52 A from Arabidopsis with 84.44% of identity |
| Eggnog | vacuolar protein sorting 52 homolog (S. cerevisiae)(ENOG410XNZ1) |
| Kegg | Link to kegg annotations (AT1G71270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420934.1) |
| Pfam | Vps52 / Sac2 family (PF04129.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |