Ll_transcript_317006

• Id Trinity: TRINITY_DN44865_c0_g1_i5
• Name Transcript: Ll_transcript_317006
• Sequence: GATGAATTCATTTCAATTTTCATTGATTCATTGTTGAATCTCTATGATCTATGTATGTATTATTCAGATCTCAGCAACAGTAACTAACTAACTAACAAAT CAACAATGGCTGATACAGTGAGTTCTCCGTCTTTTGTTGAAACCACTGATTCCAAAAACGCATTTGATTTGGGTGCATTCGTTGGGGACCTCAATTTTGA AGATCATCTAACCAATGATGATATATCGCTGGAAGGCTTAGAACAGGAACTGGAAGAATGTAAGAACAATGATGTAGTTGCAAATATATTATCTAAAGGT ACAAAACTTAGGGATTATACCAAGGGAGTTGAGAACGACTTGCGCAAACTTGAATTGGATTCAATTCAGGATTATATCAAGGAAAGTGATAATCTAGTCT CTCTTCATGATCAAATTCGTGATTGTGATAGTATCTTGTCACAAATGGAAACCCTTTTGAGTGGATTTCAGGGTGAGATTGGTTCCATTAGTTCAGACAT AAAGATTCTCCAGGAGAAGTCTATGGATATGGGTTTAAGACTTAAGAATCGCAAGGTGGCTGAATCCAAATTGGCTAAGTTTGTGGAAGACATAATAGTC CCTCCAAGGATGGTGGACATTCTTGTCGATGGAGAGGTCAATGAGGAATATATGAGAACTCTTGAGATTTTGAGTAAGAAAATAAAGTTTGTACAAGTGG ATCCAATGGTTAAAGCTTCAAAAGCTCTAAAAGATGTTCAACCTGAGCTTGAAAAGCTCCGACAAAAGGCAGTTTCAAAGGTGTTTGACTTCATTGTTCA GAAACTTTATGCACTGAGAAAACCCAAAACAAATATCCAAATACTTCAACAAAGTGTCCTTTTAAAGTACAAGTATGTTGTTATTTTCCTCAAGGAACAT GGCAAGGAAGTATATAATGAAGTTCGTGCAGCGTACATTGATACAATGAACAAGGTTCTTAGTGCACATTTCCGTGCCTATATACAAGCATTGGAGAAAC TACAGATGGATATAGCAACATCTGATGATTTAATTGGTGTAGAGACAAGAAGCAGTGGTCTATTTATTAGAGCGAGGGAACCACTGAAGAATCGATCTGC AGTATTTGCTCTGGGGGATAGGATTAATATATTAAAGGAAATTGATGAACCAGCATTGATTCCTCATATAGCTGAAGCTAGCTCCAACAAATATCCATAT GAGGTCCTATTCAGGAGCTTGCAGAAGCTTCTCATGGATACTGCTACTTCAGAATATAATTTCTGTGAAGATTTCTTTGGAGAACAATCTATATTTTATG AAATCTTTTCAGGTCCATTTGGTGTCATTGATGAGCACTTCAATTTAATACTTCCAAATTGCTATGATGCTATAGGCCTCATGCTTATGATTCGCATAAT ACACCAGCACCAGCTCATCATGTCTCGTAGGCGGATTCCTTGCTTGGACTCTTACTTAGACAAGGTCAATATTTCCCTATGGCCTCGATTTAAAATGGTG TTTGACATGCACCTCAGCAGCCTGCGTAACGCAAGTGTGAAGACGTTATGGGAAGATGATGTTCATCCTCACTATGTTATGAGGCGTTATGCTGAGTTTA CTGCTTCCCTTATCCACTTAAATGCTGAGTGTGGAGATGGCCAGCTTGATTTGAATTTGGAACGACTTAGAATGGCTATTGATGATTTGCTTATCAAGCT CGCAAAGAACTTCCTGAAACCAAAACAACAAACAGTGTTTCTTATAAACAATTATGATATGACAATCTCTGTTCTGAAGGAAGCAGGTCCCGAAGGTGGG AAAATTCTAATGCATTTTGAGGAATTACTGAAGAGCAATACAGCACTATTTGTGGAAGAACTGCTTCAAGAGCATTTCAGCGATTTAATCAAGTTTGTCA AGGCCAAAGCCTCCGAAGACTCAACGTCTAGCCCGGATAAGCCCATAACTATTGCAGAAGTGGAGCCACTAGTGAAGGATTTTGCAAGTAGGTGGAAGGG TGCAATAGAGCTGATGCACAAAGATGTGATAACTTCTTTCAGCAACTTCTTGTGTGGTATGGAGATATTAAGGGCTGCATTGACTCAGTTGTTGCTTTAT TATACCAGACTCTCAGATTGCATAAAGAGGATTGTTGGTGGCTCTGCATTGAACAAGGATCTTGTTTCAATATCTTCAATCATGTATGAAATTAGAAAAT ACTCTAGGACTTTCTAATTTCTTCAGCTTATATCTAACTACCAAACTTTACTCCTCATGGTTATATACTCAATTTATAATATGTATCACAAAGTTTCCTT TTGGACCCTCAATGTTGAAGATATTTTTTGTACAAGTTGTTTGCTGCAAAATCCATAAATCCAATCAACGTGTATAAATACATGCCC
• Tissue: pods
• Gene name: LI_gene_138484;
• Additional information: details;

Expression of Ll_transcript_317006

FPKM

• PAB: 6.5
• PNAB: 24.8
• PS1: 27.3
• PS2: 19.1
• PS3: 28.3
• PW1: 20
• PW2: 22
• PW3: 15.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_317006

• Blastp: Vacuolar protein sorting-associated protein 52 A from Arabidopsis with 84.57% of identity
• Blastx: Vacuolar protein sorting-associated protein 52 A from Arabidopsis with 84.57% of identity
• Eggnog: vacuolar protein sorting 52 homolog (S. cerevisiae)(ENOG410XNZ1)
• Kegg: Link to kegg annotations (AT1G71270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420934.1)
• Pfam: Exocyst complex component Sec3 (PF09763.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;