Ll_transcript_316929

• Id Trinity: TRINITY_DN44871_c0_g1_i2
• Name Transcript: Ll_transcript_316929
• Sequence: GGCCTAACTTACCTGGGCTTCCTCTACTGCAAACTTTTCTATCACACCCAACATTCTGAATTCTAACTGGAACCACACTAAACGACGACGCCGTTGCAAC AGGATTTTGTTCACTCGAATCACAACACATTGGTGGTTGTGATTCTCACTTGGGGGTTCCTTCTTTTCTGTTGGAAACTTGGAATTAATTTGGCTTGGCT ACCCTTCAAAACATAATGGATCAAGCACGAACGGCCTCAGGGAACGGCGAGGACAATGTTGGGATTCCAGATGATTTGCGATGCAAGAGATCAGACGGGA AACAGTGGAGATGCACTGCAATGTCCATGCCCGATAAGACAGTGTGTGAGAAGCACTACATCCAGGCTAAGAAAAGGGCTGCCAATTCTGCAATGAGAGC AAACCTCAAGAAAGCTAAGAGGAAGTCATTGGGCGATTCTGATATTTATTTGGAGAGCAAAAGTGATGATCTTGATGTGCCCCTATCATCTATTGAAGCT GATGAACATCGTTCTGGAAAGAAGTTATTGGATAAGATCTCCAAAAATCAGTTCCGTTATAACCCTGACAAGATAAAGGGTTCCACCATGCACCATGCTA TGAATCCAAATGACGATGATTCAGAGGATGAAGATGAGGCAGATACCCCTCTCTATGAAGAGAATTGGGTGTCGAACGATTCGCCCACCGCTTCTGGCGA GGACTCATCCAGGAAGCAAATGCAGATGAGCTTGGATGCTAATGCTACGACGGAACATTCTGATGGAAGTTCGGGTTCTTCCCAGGACACTGGCGGGCAA ACTTGCCATCAATGCCGGAGGAATGACAAAGAGGGAGTTACTTGGTGCCTCCAGTGTGATAGGAGAGGTTACTGTGATAACTGTATATCTTCATGGTGGG CGTGGAATTTTAGGCAGACACCTCCTTTTAATTGTAGTTGTTTTATTTGGATGGCGAGACTAATGTTTTACTTACTTATTATAGGTACTCTGACATTTCA TTGGATGAAATTCAGAGGTTATGTCCTGCGTGCCGTGGTATTTGTAATTGCAAATCTTGCTTACGTAGTGATAATTCCATAAAGGTTCGGATAAGGGAGA TACCTGTTCTAGATAAGTTACAGTATCTCCACGTGCTGCTGTCATCAGTGCTTCCTGTAGTAAAGCAGATCCATCGTGAACAGTGTTTTGAAGTTGAACT TGAAAAGAAGTTGTGTGGTGCTGAAATAGATCTTCCCAGGACAAAATTGAATGCAGATGAGCAGATGTGCTGCAATTTTTGTAGGATACCCATCATCGAT TATCATCGACGGTGTCCAAATTGCTCGTATGATTTGTGCCTTAATTGCTGCCGAGATCTCCGAAAAGCAACTATAGATCACAATAAAGAACCCCAAACAG AGCAAGCAAAAGCTTCTGACCGAAACATATTAAGTAAATTTCCTGAGTGGAGTTCCAATGACAATGGAAGTATTCCATGCCCCCCGAAGGACTATGGTGG CTGTGGTTATTTGTCATTAAATTTAAGCCGAATTTTCAAGAAGAATTGGGTTGCAAAATTGGTGAAAAATGTAGAGGAAATGGTTAGTAGCTGTAGGATT AACAATGCTGATGATCTACCAGAAACTGGGTTGAATGCTCTCAGAGTTTGCCAATATGCTCATAGAGAAGCTGGTGATGATAATTATCTTTATTGTCCAA CATCTGAAGATCTCAAAACAGATGGGATTGACAATTTTAGAAAGCACTGGAAAAGCGGTAAACCAATTATTGTTAAGCAAGTATTTGCTACGTCATCAAT CTCTAGCTGGGATCCCTTGGTCATCTGGAAAGGGATTCGTGAGACAACAGACGAAAAAATGAAAGATGAAAACAGAATTGTTAAGGCCATAGATTGCTTA GACAGGTCTGAGATTGATATCGAGCTTGGTCAGTTTATGAAAGGATACTCTGAGGGGGGTGTTCATGAAAATGGTTGGCCACGGATATTGAAGTTGAAAG ACTGGCCTTCACCAAGTGCATCTGAAGAATTTCTGTTGTACCAAAGACCTGAATTTATCAGCAAACTGCCTTTACTTCAGTATATTCACTCCAAGTGGGG CCTTCTAAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGATGTAGGGCCCAAGATTTATATATCTTATGGGATAAGTGATGAGCTTGAGAGA GGTGATTCAGTGACAAATCTTCACTTCAATATGCGTGACATGGTGTACCTTTTGGTCCATACGAATGAGTCAAAGCTGAAGGACTGTCAGAGAACTAATA TTGAAATTATACAAAAAGATTATAAGGAACCAGATGTGAAAGAGTCACCAGGAGATCCCCAAATATGTCCAAAAGAGAGTTCACCTGATTCATTAGTTGG TGCCAATAATGATGGACCCGATATGGAGTCAGACCAGAATAAGTCAATTATGGATCAAGGGTCTGAATTTCATCCCAATGTTGAAGGGAATATGGTCAAT GGTGAACTTCCACTTAAACAAAATGGAGATGTCTCTGAGGAAACAAATCCTGGACTTCTTTGGGATGTCTTTCGTCGGCAGGACATCCCGAAGGTGACTG AATATTTGAAAATGCATTGGAAAGAATTTGGGAAGACAGATGATATAGTAAATGAATTTGTGACATGGCCTCTTTATGATGGAGCTGTTTTTCTTGACAG ACACCATAAAAGCAAGTTGAAGGAAGAATTTGGTGTGGAGCCATGGTCATTTGAACAGAACATAGGGGAGGCTATATTTGTTCCTGCTGGTTGCCCTTTC CAAGCCAGAAATGTTCATTCCACTGTTCAATTGGGCCTTGATTTCTTGTCTCCGGAAAGCCTGGGGGAAGCTGTAAGATTGGCAGAGGAAGTCCGTTGTC TACCTAATGAACATGAAGCGAAACTTCAAGTATTGGAGGTTGGGAAGATATCTCTCTATGCCGCAAGTTCAGCCATCAAAGAAGTTCAGAAACTTGTACT TGACCCAAAACTTGGCTCAGAGATCGGATATGGAGATCCTAATTTGACAGCAATGGTTTCTGAGAATTACGAGAAGATGGTAAAGCGGAGGCAAATTTCT TGTGCATGAACGCCCGCATTCAACTCGGTCATTGAATCAGGAAAAAGGGATTATGTACAGTAAAGTTGTATTTAAGCAATATCATATGGGTTGGCATTTT TCAATGTAGTTGATCAAATACTCAGGTAACCCTTCAATGCGTATAGTAGATAGAAACATTTGATTTGAGAGTCATATTGATGATAAATTGCATATATATA TTTTGTATTTTATAAAGGAGAAAAGGCACATGTACTATATATACAGACTTGTTTCTGCAAGGAAGAGCCTACCTCATAGAAATTTGACTTGAGTCCTGGC CAAGCTAATTCCGGTGCCTGGGCAATTAAAGCCAAAAATGTGGTCTCAAGTCTGAAATCTAGTTCATAGTATTAAGCATTTGTGAGGGAATCCTCTCTCA AACTTGATTTTTATCAATGTGCCCTTTAGTTCATAGTATCATCTTTGGGTTTCCAAATTAGAAATATAAGAATGCCACAAAATTTGGTCGTCTCTTTGTA AAATTCATATACTC
• Tissue: pods
• Gene name: LI_gene_138498;
• Additional information: details;

Expression of Ll_transcript_316929

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0.5
• PS3: 0.2
• PW1: 0
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_316929

• Blastp: Lysine-specific demethylase JMJ25 from Arabidopsis with 34.59% of identity
• Blastx: Lysine-specific demethylase JMJ25 from Arabidopsis with 34.59% of identity
• Eggnog: lysine (K)-specific demethylase(ENOG410XTAA)
• Kegg: Link to kegg annotations (AT3G07610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428336.1)
• Pfam: JmjC domain, hydroxylase (PF02373.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;