Ll_transcript_316931

• Id Trinity: TRINITY_DN44871_c0_g1_i4
• Name Transcript: Ll_transcript_316931
• Sequence: GGCCTAACTTACCTGGGCTTCCTCTACTGCAAACTTTTCTATCACACCCAACATTCTGAATTCTAACTGGAACCACACTAAACGACGACGCCGTTGCAAC AGGATTTTGTTCACTCGAATCACAACACATTGGTGGTTGTGATTCTCACTTGGGGGTTCCTTCTTTTCTGTTGGAAACTTGGAATTAATTTGGCTTGGCT ACCCTTCAAAACATAATGGATCAAGCACGAACGGCCTCAGGGAACGGCGAGGACAATGTTGGGATTCCAGATGATTTGCGATGCAAGAGATCAGACGGGA AACAGTGGAGATGCACTGCAATGTCCATGCCCGATAAGACAGTGTGTGAGAAGCACTACATCCAGGCTAAGAAAAGGGCTGCCAATTCTGCAATGAGAGC AAACCTCAAGAAAGCTAAGAGGAAGTCATTGGGCGATTCTGATATTTATTTGGAGAGCAAAAGTGATGATCTTGATGTGCCCCTATCATCTATTGAAGCT GATGAACATCGTTCTGGAAAGAAGTTATTGGATAAGATCTCCAAAAATCAGTTCCGTTATAACCCTGACAAGATAAAGGGTTCCACCATGCACCATGCTA TGAATCCAAATGACGATGATTCAGAGGATGAAGATGAGGCAGATACCCCTCTCTATGAAGAGAATTGGGTGTCGAACGATTCGCCCACCGCTTCTGGCGA GGACTCATCCAGGAAGCAAATGCAGATGAGCTTGGATGCTAATGCTACGACGGAACATTCTGATGGAAGTTCGGGTTCTTCCCAGGACACTGGCGGGCAA ACTTGCCATCAATGCCGGAGGAATGACAAAGAGGGAGTTACTTGGTGCCTCCAGTGTGATAGGAGAGGTTACTGTGATAACTGTATATCTTCATGGTACT CTGACATTTCATTGGATGAAATTCAGAGGTTATGTCCTGCGTGCCGTGGTATTTGTAATTGCAAATCTTGCTTACGTAGTGATAATTCCATAAAGGTTCG GATAAGGGAGATACCTGTTCTAGATAAGTTACAGTATCTCCACGTGCTGCTGTCATCAGTGCTTCCTGTAGTAAAGCAGATCCATCGTGAACAGTGTTTT GAAGTTGAACTTGAAAAGAAGTTGTGTGGTGCTGAAATAGATCTTCCCAGGACAAAATTGAATGCAGATGAGCAGATGTGCTGCAATTTTTGTAGGATAC CCATCATCGATTATCATCGACGGTGTCCAAATTGCTCGTATGATTTGTGCCTTAATTGCTGCCGAGATCTCCGAAAAGCAACTATAGATCACAATAAAGA ACCCCAAACAGAGCAAGCAAAAGCTTCTGACCGAAACATATTAAGTAAATTTCCTGAGTGGAGTTCCAATGACAATGGAAGTATTCCATGCCCCCCGAAG GACTATGGTGGCTGTGGTTATTTGTCATTAAATTTAAGCCGAATTTTCAAGAAGAATTGGGTTGCAAAATTGGTGAAAAATGTAGAGGAAATGGTTAGTA GCTGTAGGATTAACAATGCTGATGATCTACCAGAAACTGGGTTGAATGCTCTCAGAGTTTGCCAATATGCTCATAGAGAAGCTGGTGATGATAATTATCT TTATTGTCCAACATCTGAAGATCTCAAAACAGATGGGATTGACAATTTTAGAAAGCACTGGAAAAGCGGTAAACCAATTATTGTTAAGCAAGTATTTGCT ACGTCATCAATCTCTAGCTGGGATCCCTTGGTCATCTGGAAAGGGATTCGTGAGACAACAGACGAAAAAATGAAAGATGAAAACAGAATTGTTAAGGCCA TAGATTGCTTAGACAGGTCTGAGATTGATATCGAGCTTGGTCAGTTTATGAAAGGATACTCTGAGGGGGGTGTTCATGAAAATGGTTGGCCACGGATATT GAAGTTGAAAGACTGGCCTTCACCAAGTGCATCTGAAGAATTTCTGTTGTACCAAAGACCTGAATTTATCAGCAAACTGCCTTTACTTCAGTATATTCAC TCCAAGTGGGGCCTTCTAAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGATGTAGGGCCCAAGATTTATATATCTTATGGGATAAGTGATG AGCTTGAGAGAGGTGATTCAGTGACAAATCTTCACTTCAATATGCGTGACATGGTGTACCTTTTGGTCCATACGAATGAGTCAAAGCTGAAGGACTGTCA GAGAACTAATATTGAAATTATACAAAAAGATTATAAGGAACCAGATGTGAAAGAGTCACCAGGAGATCCCCAAATATGTCCAAAAGAGAGTTCACCTGAT TCATTAGTTGGTGCCAATAATGATGGACCCGATATGGAGTCAGACCAGAATAAGTCAATTATGGATCAAGGGTCTGAATTTCATCCCAATGTTGAAGGGA ATATGGTCAATGGTGAACTTCCACTTAAACAAAATGGAGATGTCTCTGAGGAAACAAATCCTGGACTTCTTTGGGATGTCTTTCGTCGGCAGGACATCCC GAAGGTGACTGAATATTTGAAAATGCATTGGAAAGAATTTGGGAAGACAGATGATATAGTAAATGAATTTGTGACATGGCCTCTTTATGATGGAGCTGTT TTTCTTGACAGACACCATAAAAGCAAGTTGAAGGAAGAATTTGGTGTGGAGCCATGGTCATTTGAACAGAACATAGGGGAGGCTATATTTGTTCCTGCTG GTTGCCCTTTCCAAGCCAGAAATGTTCATTCCACTGTTCAATTGGGCCTTGATTTCTTGTCTCCGGAAAGCCTGGGGGAAGCTGTAAGATTGGCAGAGGA AGTCCGTTGTCTACCTAATGAACATGAAGCGAAACTTCAAGTATTGGAGGTTGGGAAGATATCTCTCTATGCCGCAAGTTCAGCCATCAAAGAAGTTCAG AAACTTGTACTTGACCCAAAACTTGGCTCAGAGATCGGATATGGAGATCCTAATTTGACAGCAATGGTTTCTGAGAATTACGAGAAGATGGTAAAGCGGA GGCAAATTTCTTGTGCATGAACGCCCGCATTCAACTCGGTCATTGAATCAGGAAAAAGGGATTATGTACAGTAAAGTTGTATTTAAGCAATATCATATGG GTTGGCATTTTTCAATGTAGTTGATCAAATACTCAGGTAACCCTTCAATGCGTATAGTAGATAGAAACATTTGATTTGAGAGTCATATTGATGATAAATT GCATATATATATTTTGTATTTTATAAAGGAGAAAAGGCACATGTACTATATATACAGACTTGTTTCTGCAAGGAAGAGCCTACCTCATAGAAATTTGACT TGAGTCCTGGCCAAGCTAATTCCGGTGCCTGGGCAATTAAAGCCAAAAATGTGGTCTCAAGTCTGAAATCTAGTTCATAGTATTAAGCATTTGTGAGGGA ATCCTCTCTCAAACTTGATTTTTATCAATGTGCCCTTTAGTTCATAGTATCATCTTTGGGTTTCCAAATTAGAAATATAAGAATGCCACAAAATTTGGTC GTCTCTTTGTAAAATTCATATACTC
• Tissue: pods
• Gene name: LI_gene_138498;
• Additional information: details;

Expression of Ll_transcript_316931

FPKM

• PAB: 2.5
• PNAB: 9.1
• PS1: 15
• PS2: 11.1
• PS3: 15.8
• PW1: 10.3
• PW2: 11
• PW3: 10.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_316931

• Blastp: Lysine-specific demethylase JMJ25 from Arabidopsis with 34.59% of identity
• Blastx: Lysine-specific demethylase JMJ25 from Arabidopsis with 34.59% of identity
• Eggnog: lysine (K)-specific demethylase(ENOG410XTAA)
• Kegg: Link to kegg annotations (AT3G07610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428336.1)
• Pfam: WRC (PF08879.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;