Ll_transcript_411117

Id TrinityTRINITY_DN44921_c0_g1_i9
Name TranscriptLl_transcript_411117
SequenceCAGAAAAGCACTTAAAAGCTGAAATTCAGCTTTTGTTCCTAAGATGAACACTTTAGAAAAAAATCTAACCAAATAGGTACAATTGATTTTTTAAATAATT TTTTCAAAGGAAAAGTCCTAAATAAATGGACCCTTAATCTTATGTTTTTCCTATTTTGCAGCTCTGCCTTTCTAATTCTTTATGAAAACCAGATTTGGTG CATGACTTTTTTCATTCAATGATGTTTTAGTGTTTCATGTTATGTTATGTTATTTAGGTAAGCAGTTCAACTTGCACGTGTACCAAACAGGGCAAGCTGA TTCTTCACTTTGTTGGAATGGGATTTTCCAAAGACCAAGTGATCAAAGCAATTGAGGAAAATGGTTGTCTTGCATTCTCATTTAACATGTTTGACCTTGA ATGATAAACTTAAGTTTTGTTTACGTCCATGGTAGTGGTAGGAGAAGAAAATGAGGAAGACATTTTGGAAACTCTGCTAACACTCACTACTTTGACTGTG AGTAACTCTTATTTATACTACTTTGCCTAGAACTTTAGCTTCTTGTCCATGTACTATAGAAATCAAGCTGTGGCTTTTAAATTCTTTTAGGATTCACAAA TTATTGAGATTTGTACATGCTTCTTTAAAGACAAGCACATTTCTGTCATAGATCGAACCTCACATTCAAATAATGATTTGAGTGCATATGGTAGGCATGT CTCACTTAGATTCTCACTTGTGAAGCATTGAGAGTTTATGATTGAGTCATTAAAACATGAAATTATTTTTTGACTTTCATGTGTTACTCTTATGAATGAT TTGTTGTCACTCACTTGATGGTTGTTTTTGTGATCTAATGTCAAGTTCAAAGTATGAACTAGCTAAAAGTATATTCTGCCAACCTATTTATTTGTGATAA AGAAAGCTTGTTTTCATTGTAATGCTCAAATCTTATGCAAACATGATATATATGGATGTATGATGACCATCTGTTACTTGAGACAGATCACATCACGTTT TAAGTTTTAGGTGATACACGAAATTCAGAGATTCGACATATAAATGTCCATTTGTGATTGACATAAATAATGTCATTAACGACTGTCAAGTATGTGATGC CACCACCTTCTTTATAGAAGACTATAATCTTCCTTTTTATAACATCATTGAGCTTGCAGACTCTAGAGGATCCTTCACCAGGTGCTTCTAATAGGCCATT TTCTTCTGCTAAGAAAATTGTTAACCTACTTGATAGCTCTGATGATGAGGATAGTTATCCAGGAAGTGGGGTAATTTCTATGTGCATGATTTTATTTCTT ATCTGTATTTATGTATATAACTTCACATTCATCCTTGTAATTGAAATTCACTATTCATTGTAATAAAGTATTCACATTCATCCTGGCAAAACATGTATTA TGAAAGTGCAAAAGTTTGCAGTTATTAGAAAAGAAGGGAGAAAGTTACAAGAGAACAAAAAGCACCTAGAAACTGCATGAGTGTGATTCTCTTTACATAT ATTCTCATGTGTCGCTAACATCATGTAACTAGGTCTCATTTAACTAATTCCATTTATGCAGGAAAACAGTTTTAACTTTGAAAGGGACAAGATACTGACA GTACTAGTGAACATGGAATACCCTATTGAGGAGGCTTTGATAGCTATAGAGAAATGTGGCCCTGAAGCCGAAATCTGTGAGCTTACAGATTTCATTTGTG CTGCTCAATTAGAAAAGGAAATTGACACTCATCTTCAAAATTTGCCTAAGAAGAAACAAGATGTATCTGTTTCTATGCATAAAAAGCGAAGGCGTGGTTA TTACTTTCACAGAGATAAGAGATTGAAACTTGATGATGAGGGGAAGGTATCGGCAATTGATATGGAGATGAAGCAAATGCGATCCTCTGAATCCATGACC GGATTTGGTACACGCAATCAACTCTATCCTGCTGTTGCAAGAAGGCTCCGGCATAAAGTAACAGCAGGCCAACCATACTTCTATTATGAAAATGTGGCTG GTGCTCCTAAAGGAGTTTGGAGGAAGATATCCAGTTTTCTGTTTGAGATTGAGCCAGAATTTGTTGATTCAAACTACTTTTGTGCTGCAGCAAGGAAAAG GGGATACATCCATAATCTTCCCATCGAAAATCGTTCTCGCCTGCTTCCTATCCCACCACTCACTATCCAAGAAGCTTTACCTACAACCAAAAGGTGGTGG CCTTCATGGGACACAAGAATACAACTCAATTGCCTTATAACTACCATAGCTCCTGCCACAGTAACAGAGAAAATAAGGAAAGCCCTTGAGGAATGTGATG CCAAACCGCCTCCAACTGTCCGAGAATATGTACGTAAGGAGTGTAAAAACTGGAATTTGGTTTGGGTTGGGAAGAACAAAGTGGCACCTCTTGAGCCTGA TGAATATGAGATGCTACTGGGATTCCCAAAGGATCACACTAGAGGCGGTGGAATCAGCCGGACAATGAGATACAAGGCACTTGGAAATGCATTTCAGGTT GATACAGTTGCCTACCATCTTTCAGTTTTAAAGGGTCGTTTTCCAAAGGGCATCAATGTTCTATCCCTCTTCTCTGGCATTGGGGGTGCTGAGGTTGCTT TACATGGGCTTGGGATAATGCTAAGAAATGTGGTATCTGTGGAAGTAGCCGAAGAAAACCGAAACATTCTTCGCAGTTGGTGGGAACAGACTAACCAACA GGGAAATCTAATTGAGGTTAAGGATGTTCAGCATGTTACTTGGGATCAGTTGGAGCAATGGATAACCTCTTTTGGTGGATTTGACCTCATCATTGGAGGG AGTCCCTGCAACAACATTAGTGGCAGCAACAGGGTGAGTAGAAATGGACTGGAGGGAAAGCACTCATCCCTTTTCTATGAATATTATAGGATTGTTGAGG CAATTATGCATATACAGTGATAACAAGCTTATGTAAAAATTACATTTCACAAGTGATTTTGTTAATTCCAACTTAATTCTGTAAATGTACTTGGCAAGCT TATGTAAAAAAGGGGGAAATTAGATTACACAAGTGATTTTGTTAGTTCCAACTTAATTCTGTAAATGT BLAST
Tissuepods
Gene nameLI_gene_138578; 
Additional informationdetails; 

Expression of Ll_transcript_411117

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_411117
BlastpDNA (cytosine-5)-methyltransferase DRM2 from Oryza sativa with 55.88% of identity
BlastxDNA (cytosine-5)-methyltransferase DRM2 from Oryza sativa with 55.65% of identity
EggnogDNA (cytosine-5-)-methyltransferase(ENOG410XQ4Y)
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019422938.1)
PfamC-5 cytosine-specific DNA methylase (PF00145.16)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;