Id Trinity | TRINITY_DN44987_c0_g1_i2 |
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Name Transcript | Ll_transcript_411245 |
Sequence | ATAGAGCTACATTGAGAAACATAATCTGAAGCGAAAAACTTCACCATTTCTCTTCTCCTTCCTCCTCGGTCATCACTCCTCACCGGAGAGAAGAAGAAAA GAAAGCTTTGCGATCACTATTCACATTCAAATTCGATTCTTCTATTTCCAATTTCAACAATGCTTCAAAACGACGACATTCGATTCATCTCTTCTTCAAT CAAAATCCCTATTCCTCCCAAATCCCCAACCTTCACTTCTCACTTCACCAACGCCACAAAAACCGTCACTCAACTAATTGACTCGTTCAAAACTCACTCC AATGAGTTCACTCGCTCCGTCTTCGGAAAACCGTCACTCATGTGCTCAACAACACTTTCCTTGATAAAACCGTTTCGGAAGCGGTCATCACCGATTCTAT GTTCAGCTTCGTTGTCTCTGTCCGAGTCGACTCAGTCTCAGGGGACTCGACAGAACGAGGAGAGGGTTCTGATAAGCGAGGTGCTGGTTCGGAACAAAGA AGGAGAAGAACTCGAGAGGAAGGACCTCGAAGCTGAAGCGTTGCAGGCTTTGAAAGCGTGTCGACCTAACTCGGCGTTGACCGTGAGTGAGGTACAAGAT GATGTGCATAGAATCATTAACAGTGGCTATTTCTGTTCCTGCATGCCCGTTGCTGTTGATACTCGTGATGGCATCCGATTAGTATTTCAGGTAGAACCAA ATCAAGAGTTCCAAGGGTTAGTATGTGAGGGAGCTAATGTTCTTCCAGCTAAGTATTTAGAGGACTCTTTTCGAGATGGATATGGGAAAGTTATCAATCT GAGGCGCTTGGATGAAGCAATATCTTCCATTAATGGGTGGTATATGGAGCGTGGTCTTTTTGCTATGGTTTCAGATGTTGAGATTCTTTCTGGAGGTGTT CTAAAATTAAACGTTTCAGAGGCTGAGGTCAATAATATGTCCATACGGTTTCTTGACAGGAAGACAGGTGAGCCTACTATAGGGAAGACAAAGCCTGAAA CGTTACTTCGGCAAATTACAACCAAGAAGGGACAGGTCTACAGCATGCTTCAGGGAAAAAGAGATGTAGAGACTGTATTAACTATGGGGATCATGGAAGA TGTTAGCATTATTCCTCAACCAGCAGACACTGGGAAGGTTGATTTGGTGATGAATGTGGTGGAACGTCCAAGTGGAGGATTTTCTGCTGGTGGTGGAATA TCAACGGCGATTACAAGTGGCCCGCTGAGAGGACTCATAGGAAGCTTCGCCTATTCTCACAGGAATGTTTTTGGGAGAAACCAGAAACTCAATATTTCAT TAGAGAGGGGTCAGATTGACTCAATATTTCGTATAAATTACACGGACCCTTGGATTCAAGGAGATGATAAAAGAACATCTGGAACAATAATGATTCAGAA TTCAAGAACGCCTGGAACAATTGTTCATAGTAATGAGGATGGTGACAGTAACCTGACCATTGGCCGCATGACAGGTGGTATAGAGTTAAGTCGACCGATC AGGCCAAAGTGGAGTGGAACAGCCGGACTTGTTTTCCAGCATGCTGGGGTCCGTGATGACAAAGGGGCTCCTATCATCAAGGATTGTTACAGACGTCCTC TTACTGCAAGTGGCAATAACCATGATGAGACATTGCTTGCTAAATTTGAGACTGTTTACACTGGCTCTGGCGACCAAGGGTCTTCAATGTTTGTTCTTAA CTTGGAACAAGGACTTCCACTTTTGTCTGAATGGTTGTCCTTCACAAGGGTGAATGCACGTGCTAGGAAAGGTTTTGAGATAGGTCCTGCTCACCTTCAT TTAAGTCTATTTGGGGGTCACGTGGTGGGGAACTTCTCACCCTTTGAAGCCTTTGCGATTGGTGGAACAAACAGCGTAAGAGGCTATGAAGAAGGTGCTG TGGGCTCTGGTCGATCTTATGTTGTTGGATCTGGAGAAATTTCTTTCCCCATGTTGGGACCAGTTGAAGGTGTCTTATTTTCTGACTATGGGACTGATCT AGGAACAGGCCCAACCGTCCCTGGTGACCCAGCCGGAGCAAGGCTGAAGCCTGGAAGCGGATATGGGTACGGGTTTGGCATCCGTGTTGATTCACCTTTG GGTCCTTTGCGTCTTGAATATGCCTTTAATGACAAGAAATACCAGAGGTTTCACTTTGGAGTTGGCCATAGAAATTAAACGCCCTCTCAGGGTACAAGTT CTACTAGGTTGGTTATTCTTGATTGTTTCATATGTATCCCAATTTTTTGTAACTTGCATAGGCTTTCCCTTATTTGGGAAACTTGTTTATCATTTTTTCA AAACCATATTTATTCAGCTGCCTTGATACTTTTAAATGTTTCCCATTTTTGGTTCATTTTGCTTTTCATCTTCCCAGTTTCAAAGCTGTTGATTGCAATG AAAGTGAATTTTGGCATAGGCCAACTTTACCAGCAAGGTTATCCCGGTGAAAGATTAAATAAAGAACACAGGTTTTTCCTGCATAGACCGAGTTTGATAT CAATACTTCATGTTCTTTCGACGAATATTCGCAAGGTGAGATAAGTATACAATGGATTAGTCAGGAACTCAAGATTTAGATAGATTAGTCTATAAAATAA ATGCAAATTTCTCTCGAGGAACTGAAAAACTAATGTTTTAAATAAATAATAGATACCGCATCTATAGACGTATTGAATCAAATCAAACATTAAATTTTGA AGAGGCAAATATGTTATAAATGTTTGAAATTAGATCTAATGATGCAAATCAATGGGGCTTTTTATTGGGATCTGCATATGAGATAGGGTGAAGAAGTTGG GAAATGAAGAGTATAGATTGTAGACAAAACTGACAAATAGAAGACAATATGAATGACTTGGGAAACGTGGTACAAATATCATCCTCGGACTCGACGGTTT AGCAATAATTGTTGATTAATTGTATATTGCTGATTCCCGTAACATTATAATTATTTGTTGATTAATTGTGTATTTCAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_138708; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_411245
Blastp | Outer envelope protein 80, chloroplastic from Arabidopsis with 69.14% of identity |
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Blastx | Outer envelope protein 80, chloroplastic from Arabidopsis with 68.48% of identity |
Eggnog | Gram-negative-bacterium-type cell outer membrane assembly(COG4775) |
Kegg | Link to kegg annotations (AT5G19620) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458659.1) |
Pfam | Surface antigen (PF01103.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |