Ll_transcript_411247

• Id Trinity: TRINITY_DN44987_c0_g1_i4
• Name Transcript: Ll_transcript_411247
• Sequence: ATAGAGCTACATTGAGAAACATAATCTGAAGCGAAAAACTTCACCATTTCTCTTCTCCTTCCTCCTCGGTCATCACTCCTCACCGGAGAGAAGAAGAAAA GAAAGCTTTGCGATCACTATTCACATTCAAATTCGATTCTTCTATTTCCAATTTCAACAATGCTTCAAAACGACGACATTCGATTCATCTCTTCTTCAAT CAAAATCCCTATTCCTCCCAAATCCCCAACCTTCACTTCTCACTTCACCAACGCCACAAAAACCGTCACTCAACTAATTGACTCGTTCAAAACTCACTCC AATGAGTTCACTCGCTCCGTCTTCGGAAAACCGTCACTCATGTGCTCAACAACACTTTCCTTGATAAAACCGTTTCGGAAGCGGTCATCACCGATTCTAT GTTCAGCTTCGTTGTCTCTGTCCGAGTCGACTCAGTCTCAGGGGACTCGACAGAACGAGGAGAGGGTTCTGATAAGCGAGGTGCTGGTTCGGAACAAAGA AGGAGAAGAACTCGAGAGGAAGGACCTCGAAGCTGAAGCGTTGCAGGCTTTGAAAGCGTGTCGACCTAACTCGGCGTTGACCGTGAGTGAGGTACAAGAT GATGTGCATAGAATCATTAACAGTGGCTATTTCTGTTCCTGCATGCCCGTTGCTGTTGATACTCGTGATGGCATCCGATTAGTATTTCAGGTAGAACCAA ATCAAGAGTTCCAAGGGTTAGTATGTGAGGGAGCTAATGTTCTTCCAGCTAAGTATTTAGAGGACTCTTTTCGAGATGGATATGGGAAAGTTATCAATCT GAGGCGCTTGGATGAAGCAATATCTTCCATTAATGGGTGGTATATGGAGCGTGGTCTTTTTGCTATGGTTTCAGATGTTGAGATTCTTTCTGGAGGTGTT CTAAAATTAAACGTTTCAGAGGCTGAGGTCAATAATATGTCCATACGGTTTCTTGACAGGAAGACAGGTGAGCCTACTATAGGGAAGACAAAGCCTGAAA CGTTACTTCGGCAAATTACAACCAAGAAGGGACAGGTCTACAGCATGCTTCAGGGAAAAAGAGATGTAGAGACTGTATTAACTATGGGGATCATGGAAGA TGTTAGCATTATTCCTCAACCAGCAGACACTGGGAAGGTTGATTTGGTGATGAATGTGGTGGAACGTCCAAGTGGAGGATTTTCTGCTGGTGGTGGAATA TCAACGGCGATTACAAGTGGCCCGCTGAGAGGACTCATAGGAAGCTTCGCCTATTCTCACAGGAATGTTTTTGGGAGAAACCAGAAACTCAATATTTCAT TAGAGAGGGGTCAGATTGACTCAATATTTCGTATAAATTACACGGACCCTTGGATTCAAGGAGATGATAAAAGAACATCTGGAACAATAATGATTCAGAA TTCAAGAACGCCTGGAACAATTGTTCATAGTAATGAGGATGGTGACAGTAACCTGACCATTGGCCGCATGACAGGTGGTATAGAGTTAAGTCGACCGATC AGGCCAAAGTGGAGTGGAACAGCCGGACTTGTTTTCCAGCATGCTGGGGTCCGTGATGACAAAGGGGCTCCTATCATCAAGGATTGTTACAGACGTCCTC TTACTGCAAGTGGCAATAACCATGATGAGACATTGCTTGCTAAATTTGAGACTGTTTACACTGGCTCTGGCGACCAAGGGTCTTCAATGTTTGTTCTTAA CTTGGAACAAGGACTTCCACTTTTGTCTGAATGGTTGTCCTTCACAAGGGTGAATGCACGTGCTAGGAAAGGTTTTGAGATAGGTCCTGCTCACCTTCAT TTAAGTCTATTTGGGGGTCACGTGGTGGGGAACTTCTCACCCTTTGAAGCCTTTGCGATTGGTGGAACAAACAGCGTAAGAGGCTATGAAGAAGGTGCTG TGGGCTCTGGTCGATCTTATGTTGTTGGATCTGGAGAAATTTCTTTCCCCATGTTGGGACCAGTTGAAGGTGTCTTATTTTCTGACTATGGGACTGATCT AGGAACAGGCCCAACCGTCCCTGGTGACCCAGCCGGAGCAAGGCTGAAGCCTGGAAGCGGATATGGGTACGGGTTTGGCATCCGTGTTGATTCACCTTTG GGTCCTTTGCGTCTTGAATATGCCTTTAATGACAAGAAATACCAGAGGTTTCACTTTGGAGTTGGCCATAGAAATTAAACGCCCTCTCAGGGTACAAGTT CTACTAGTTTCAAAGCTGTTGATTGCAATGAAAGTGAATTTTGGCATAGGCCAACTTTACCAGCAAGGTTATCCCGGTGAAAGATTAAATAAAGAACACA GGTTTTTCCTGCATAGACCGAGTTTGATATCAATACTTCATGTTCTTTCGACGAATATTCGCAAGGTGAGATAAGTATACAATGGATTAGTCAGGAACTC AAGATTTAGATAGATTAGTCTATAAAATAAATGCAAATTTCTCTCGAGGAACTGAAAAACTAATGTTTTAAATAAATAATAGATACCGCATCTATAGACG TATTGAATCAAATCAAACATTAAATTTTGAAGAGGCAAATATGTTATAAATGTTTGAAATTAGATCTAATGATGCAAATCAATGGGGCTTTTTATTGGGA TCTGCATATGAGATAGGGTGAAGAAGTTGGGAAATGAAGAGTATAGATTGTAGACAAAACTGACAAATAGAAGACAATATGAATGACTTGGGAAACGTGG TACAAATATCATCCTCGGACTCGACGGTTTAGCAATAATTGTTGATTAATTGTATATTGCTGATTCCCGTAACATTATAATTATTTGTTGATTAATTGTG TATTTCAAAA
• Tissue: pods
• Gene name: LI_gene_138708;
• Additional information: details;

Expression of Ll_transcript_411247

FPKM

• PAB: 3.2
• PNAB: 7.2
• PS1: 6.2
• PS2: 4.6
• PS3: 6
• PW1: 4.2
• PW2: 2.9
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_411247

• Blastp: Outer envelope protein 80, chloroplastic from Arabidopsis with 69.14% of identity
• Blastx: Outer envelope protein 80, chloroplastic from Arabidopsis with 68.48% of identity
• Eggnog: Gram-negative-bacterium-type cell outer membrane assembly(COG4775)
• Kegg: Link to kegg annotations (AT5G19620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458659.1)
• Pfam: Surface antigen (PF01103.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;