Ll_transcript_410875

• Id Trinity: TRINITY_DN44991_c0_g1_i1
• Name Transcript: Ll_transcript_410875
• Sequence: GAGAAACAACATGAGTTTAGATTCCTCCGCTGAAAGACATAAATAGGCAACAAATGTGATTGGCTTTGTTGTTTGATAAAACATTTGCCATTCACTCACT CACTCACTCAAACATAGACAGATAGGTTTATTTGGTGATGACTTCTTTGGTGGGTCCACTTGTTCTTTCTCCAGATTCTGGTTACAGAATTTGGGAGGAT CCTTCTTTCATCAAATGGAGAAAAAGAGATTCACATGTTACCCTCCATTGTCATGACTCTGTTGAAGGATCTCTTAAATATTGGTATAAACGCAACCAGG TGGATCATTTGGTTTCAAAAACTGCTGTTTGGAATGATGATGCTGTTGATGAAGCTCTTGATTGTTGTGCATTTTGGGTCAAAGACTTGCCGTTTGTTAA GTCCTTGTCTGGACATTGGAAATTTTTCCTTGCTGACAGTCCAAACACTGTCCCTGATAAATTTTTTGAAAGTGATTTCCAGGATTTGGAGTGGAAATTT TTGCCCGTTCCTTCAAATTGGCAGATGCATGGATATGATGTCCCTATATATACAAATGTTGTGTATCCATTTCCAGTAGATCCTCCTTTGGTTCCTATGG AAAATCCTACTGGCTGCTATAGAACAGAATTCCATATTCCTAAAGAATGGGAGGGTAGAAGAATTTTGTTACATTTTGAAGCTGTTGATTCTGCCTTTTG TGCATGGATAAATGGGCATCCAATAGGATATAGCCAAGACAGCAGACTACCTGCAGAGTTTGAAGTCACTGATTTTTGTCACCCATGTGGTTCAGACCTT AAGAATGTTCTAGCTGTTCAAGTGTTTAGATGGAGTGATGGATCTTACCTTGAAGATCAGGACCAATGGCGGTTATCTGGCATCCACCGTGATGTGCTTC TTCTTGCAAAGCCGAAGGTATTTATCACTGACTATTTTTTCAAATCAATCCTTGCCGAAGATTTTTCTTCCGCGGAGATACTGGTTGAAGTGAAAATAGA TAATTCGCGAGAGACATCCAAGGATAATATTCTTACAAACTATACCGTAGAAGCTGCACTATATGATTCTGGGAGCTGGTATACTTCTGATGGAAATACT GATCTCCTTTCATCTAATGTAGCTGACATAAAGTTCCAACCATCCACTGCAACAACACCACTAGGATTTCATGGTTATACGCTTGTTGGAAAACTGCAGT CGCCAAAGCTTTGGTCTGCTGAGCAACCATTCCTCTACACCCTAGTTGTTGTCCTGAAAGATCAATCTGGCCACATTGTTGACTGCGAGTCATGTCCAGT AGGCTTTAGAAATGTAACTAAAGCCCACAAACAGCTGCTGGTTAATGGACAAGCTGTCATAATACGTGGTGTGAACAGGCATGAACATCATCCACGAGTT GGAAAGGCAAATATAGAGTCCTGTATGATAAAGGATTTGGTCTTAATGAAGCAAAATAATATTAATGCTGTAAGGAACAGTCATTATCCCCAACATCCAC GTTGGTATGAGCTATGTGATCTGTTTGGCATGTACATGATAGATGAAGCGAACATTGAGACACATGGTTTCGATTATATTAAACATCTCAAGCATCCAAC CCTGGAACCAATTTGGGCATCTTCAATGTTGGATCGTGTGATTGGCATGGTTGAGAGAGATAAAAATCACACATGCATCATCTCTTGGTCTTTAGGGAAT GAATCTGGATTTGGACATAATCATTATGCTTTAGCTGGTTGGATTCGAGGAAGAGATTCATCACGCGTATTACATTATGAAGGAGGTGGATCGAGAACTC CATGCACAGATATTGTGTGCCCTATGTATATGCGTGTTTGGGACATGTTGAAAATTGCAAATGATCCTGCAGAAACACGTCCTCTAATACTTTGCGAGTA TTCACATGCAATGGGCAACAGCAACGGAAATCTACATACATATTGGGAGGCAATTGACAACACATTTGGTCTCCAAGGAGGGTTTATTTGGGATTGGGTT GATCAGGCCCTTCTGAAGCTGGATGAAAATGGTGTGAAGCGTTGGGCATATGGCGGTGAATTTGGGGATATGCCCAATGACTTGAATTTCTGCTTGAATG GCCTCACGTTCCCTGATCGAACAGCTCACCCTGTTTTACATGAAGTTAAGTACCTATACCAACCCATCAAGGTGATTTTACATGATGGGAAATTGGAGAT AAAGAACACTCATTTTTTTCAAACAACAGAAGGATTAGAGTTTAGCTGGTATGCTTCTGCAGATGGATGCAACCTTGGATCTGGGGTGTTGAGTCTTGCC CCAATAAAGCCCCAGAGCAGTTATACTATTGATTGGCAATCAGGTCCGTGGTATTCTCTATGGGCTTCATCATCATCGGAAGAAATATTCCTGACTATAA CTGCCAAGCTTTTGAACTCCACACGCTGGGTTGAGGCCGGTCATGTCATTTCATCTACACAAGTCCAACTGCCTGCCAGAAGAGACATTGTTCCCCATGC TATCAGTATTAGTAGTGGGACTCTAGTAGCTGAAACTCTAGGAGATACAATCAAAGTTAGCCAGCAAGATGTTTGGGACATAACATTGAACACTAAAACA GGTTCAGTTGAAAGCTGGAAGGTTGAAGGAGTAAATGTTATGAGCAAGGGCATATTCCCAAGTTTCTGGCGAGCTCCTATTGATAATGACAAAGGGGGAG AATCTGCTAGTTATTTGTCCAGGTGGAAAGCTGCTGGAATTGATAACCTCCACTTTATTACTGAAAGATGTTCCATAGTGAGTACGGCGGAGGACACGGT TAAAATATTGGTGGTTTTTCTTGGTATCACCAAGGGTGATCAAGACAAGTCAAATATTTTATTCACAACTGATGTTTCATATACAATTTATGCTTCTGGG GATGTTATTATGGAATGCAACGTAAAACCGAACCCTGATCTCCCTCCTTTGCCGCGTGTTGGAATCAAGTTCAATGTGGAGAAGTCATTGGATCAAGTAA CATGGTACGGAAGAGGGCCACATGAGAGTTATCCAGATCGAAAGGCTTCTGCTCAAGTCGCAGTCTACGAGAAGAATGTTAAAGATTTGCATGTTCCTTA TGTTGTTCCTGGAGAATGTTCTGGTAGGGCAGATGTAAGATGGGTAACATTGAGAAACAAAAATGGTTTTGGGATATATGCTTCTAGGTATGGTAACTCT CCACCCATGCAAATGAGTGCAAGTTACTACAGCACATCAGAGCTTGACCGGGCCACACACAATCACACGCTCATTGAAGGAGATAGCATTGAGGTTCATC TTGATCACAAGCATATGGGTTTAGGTGGAGATGATAGTTGGTCACCATGTGTACATGACCAGTATTTGGTTCCTCCTGTGCCATACTCTTTCTCTGTCAG GTTATCTCCTGTAACTCCAGCCATGTCTGGTTATGACATCTACAAATCCCAGCTTCAAAATTCTTGATTTCTTGGAGTCCAAGAAACATCATCATGAAGA AGACAGACTTGTGGGTACTTGATGTTATAGGATATAGGAAAGACAAATAATGTTGCTTCACTTGATAAAATAACAATTTCACATTTTGGTCAATAAAATT GCTCTAATTTCGCATCTTGGTTAATAAATGTTCTGTAAGTGTGATATGGATAATGTATTTTTCAAATTTAAAGATTAATTATAATGGAATTAATGAAAAT AAAGTATAGCTAGTTGATGCC
• Tissue: pods
• Gene name: LI_gene_138715;
• Additional information: details;

Expression of Ll_transcript_410875

FPKM

• PAB: 2.4
• PNAB: 11.3
• PS1: 16.9
• PS2: 8.4
• PS3: 13.1
• PW1: 13
• PW2: 14.3
• PW3: 12.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_410875

• Blastp: Beta-galactosidase from Vibrio with 40.24% of identity
• Blastx: Beta-galactosidase from Vibrio with 40.24% of identity
• Eggnog: hydrolase family 2(COG3250)
• Kegg: Link to kegg annotations (VC0395_A1917)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413402.1)
• Pfam: Glycosyl hydrolases family 2, sugar binding domain (PF02837.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;