Ll_transcript_410879

• Id Trinity: TRINITY_DN44991_c0_g1_i4
• Name Transcript: Ll_transcript_410879
• Sequence: GAGAAACAACATGAGTTTAGATTCCTCCGCTGAAAGACATAAATAGGCAACAAATGTGATTGGCTTTGTTGTTTGATAAAACATTTGCCATTCACTCACT CACTCACTCAAACATAGACAGATAGGTTTATTTGGTGATGACTTCTTTGGTGGGTCCACTTGTTCTTTCTCCAGATTCTGGTTACAGAATTTGGGAGGAT CCTTCTTTCATCAAATGGAGAAAAAGAGATTCACATGTTACCCTCCATTGTCATGACTCTGTTGAAGGATCTCTTAAATATTGGTATAAACGCAACCAGG TGGATCATTTGGTTTCAAAAACTGCTGTTTGGAATGATGATGCTGTTGATGAAGCTCTTGATTGTTGTGCATTTTGGGTCAAAGACTTGCCGTTTGTTAA GTCCTTGTCTGGACATTGGAAATTTTTCCTTGCTGACAGTCCAAACACTGTCCCTGATAAATTTTTTGAAAGTGATTTCCAGGATTTGGAGTGGAAATTT TTGCCCGTTCCTTCAAATTGGCAGATGCATGGATATGATGTCCCTATATATACAAATGTTGTGTATCCATTTCCAGTAGATCCTCCTTTGGTTCCTATGG AAAATCCTACTGGCTGCTATAGAACAGAATTCCATATTCCTAAAGAATGGGAGGGTAGAAGAATTTTGTTACATTTTGAAGCTGTTGATTCTGCCTTTTG TGCATGGATAAATGGGCATCCAATAGGATATAGCCAAGACAGCAGACTACCTGCAGAGTTTGAAGTCACTGATTTTTGTCACCCATGTGGTTCAGACCTT AAGAATGTTCTAGCTGTTCAAGTGTTTAGATGGAGTGATGGATCTTACCTTGAAGATCAGGACCAATGGCGGTTATCTGGCATCCACCGTGATGTGCTTC TTCTTGCAAAGCCGAAGGTATTTATCACTGACTATTTTTTCAAATCAATCCTTGCCGAAGATTTTTCTTCCGCGGAGATACTGGTTGAAGTGAAAATAGA TAATTCGCGAGAGACATCCAAGGATAATATTCTTACAAACTATACCGTAGAAGCTGCACTATATGATTCTGGGAGCTGGTATACTTCTGATGGAAATACT GATCTCCTTTCATCTAATGTAGCTGACATAAAGTTCCAACCATCCACTGCAACAACACCACTAGGATTTCATGGTTATACGCTTGTTGGAAAACTGCAGT CGCCAAAGCTTTGGTCTGCTGAGCAACCATTCCTCTACACCCTAGTTGTTGTCCTGAAAGATCAATCTGGCCACATTGTTGACTGCGAGTCATGTCCAGT AGGCTTTAGAAATGTAACTAAAGCCCACAAACAGCTGCTGGTTAATGGACAAGCTGTCATAATACGTGGTGTGAACAGGCATGAACATCATCCACGAGTT GGAAAGGCAAATATAGAGTCCTGTATGATAAAGGATTTGGTCTTAATGAAGCAAAATAATATTAATGCTGTAAGGAACAGTCATTATCCCCAACATCCAC GTTGGTATGAGCTATGTGATCTGTTTGGCATGTACATGATAGATGAAGCGAACATTGAGACACATGGTTTCGATTATATTAAACATCTCAAGCATCCAAC CCTGGAACCAATTTGGGCATCTTCAATGTTGGATCGTGTGATTGGCATGGTTGAGAGAGATAAAAATCACACATGCATCATCTCTTGGTCTTTAGGGAAT GAATCTGGATTTGGACATAATCATTATGCTTTAGCTGGTTGGATTCGAGGAAGAGATTCATCACGCGTATTACATTATGAAGGAGGTGGATCGAGAACTC CATGCACAGATATTGTGTGCCCTATGTATATGCGTGTTTGGGACATGTTGAAAATTGCAAATGATCCTGCAGAAACACGTCCTCTAATACTTTGCGAGTG AGCTTTCTTTGTTTTTGCGATGTATTCACATGCAATGGGCAACAGCAACGGAAATCTACATACATATTGGGAGGCAATTGACAACACATTTGGTCTCCAA GGAGGGTTTATTTGGGATTGGGTTGATCAGGCCCTTCTGAAGCTGGATGAAAATGGTGTGAAGCGTTGGGCATATGGCGGTGAATTTGGGGATATGCCCA ATGACTTGAATTTCTGCTTGAATGGCCTCACGTTCCCTGATCGAACAGCTCACCCTGTTTTACATGAAGTTAAGTACCTATACCAACCCATCAAGGTGAT TTTACATGATGGGAAATTGGAGATAAAGAACACTCATTTTTTTCAAACAACAGAAGGATTAGAGTTTAGCTGGTATGCTTCTGCAGATGGATGCAACCTT GGATCTGGGGTGTTGAGTCTTGCCCCAATAAAGCCCCAGAGCAGTTATACTATTGATTGGCAATCAGGTCCGTGGTATTCTCTATGGGCTTCATCATCAT CGGAAGAAATATTCCTGACTATAACTGCCAAGCTTTTGAACTCCACACGCTGGGTTGAGGCCGGTCATGTCATTTCATCTACACAAGTCCAACTGCCTGC CAGAAGAGACATTGTTCCCCATGCTATCAGTATTAGTAGTGGGACTCTAGTAGCTGAAACTCTAGGAGATACAATCAAAGTTAGCCAGCAAGATGTTTGG GACATAACATTGAACACTAAAACAGGTTCAGTTGAAAGCTGGAAGGTTGAAGGAGTAAATGTTATGAGCAAGGGCATATTCCCAAGTTTCTGGCGAGCTC CTATTGATAATGACAAAGGGGGAGAATCTGCTAGTTATTTGTCCAGGTGGAAAGCTGCTGGAATTGATAACCTCCACTTTATTACTGAAAGATGTTCCAT AGTGAGTACGGCGGAGGACACGGTTAAAATATTGGTGGTTTTTCTTGGTATCACCAAGGGTGATCAAGACAAGTCAAATATTTTATTCACAACTGATGTT TCATATACAATTTATGCTTCTGGGGATGTTATTATGGAATGCAACGTAAAACCGAACCCTGATCTCCCTCCTTTGCCGCGTGTTGGAATCAAGTTCAATG TGGAGAAGTCATTGGATCAAGTAACATGGTACGGAAGAGGGCCACATGAGAGTTATCCAGATCGAAAGGCTTCTGCTCAAGTCGCAGTCTACGAGAAGAA TGTTAAAGATTTGCATGTTCCTTATGTTGTTCCTGGAGAATGTTCTGGTAGGGCAGATGTAAGATGGGTAACATTGAGAAACAAAAATGGTTTTGGGATA TATGCTTCTAGGTATGGTAACTCTCCACCCATGCAAATGAGTGCAAGTTACTACAGCACATCAGAGCTTGACCGGGCCACACACAATCACACGCTCATTG AAGGAGATAGCATTGAGGTTCATCTTGATCACAAGCATATGGGTTTAGGTGGAGATGATAGTTGGTCACCATGTGTACATGACCAGTATTTGGTTCCTCC TGTGCCATACTCTTTCTCTGTCAGGTTATCTCCTGTAACTCCAGCCATGTCTGGTTATGACATCTACAAATCCCAGCTTCAAAATTCTTGATTTCTTGGA GTCCAAGAAACATCATCATGAAGAAGACAGACTTGTGGGTACTTGATGTTATAGGATATAGGAAAGACAAATAATGTTGCTTCACTTGATAAAATAACAA TTTCACATTTTGGTCAATAAAATTGCTCTAATTTCGCATCTTGGTTAATAAATGTTCTGTAAGTGTGATATGGATAATGTATTTTTCAAATTTAAAGATT AATTATAATGGAATTAATGAAAATAAAGTATAGCTAGTTGATGCC
• Tissue: pods
• Gene name: LI_gene_138715;
• Additional information: details;

Expression of Ll_transcript_410879

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.1
• PS2: 0.1
• PS3: 0.3
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_410879

• Blastp: Beta-galactosidase from Vibrio with 43.62% of identity
• Blastx: Beta-galactosidase from Vibrio with 39.95% of identity
• Eggnog: hydrolase family 2(COG3250)
• Kegg: Link to kegg annotations (VC0395_A1917)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413402.1)
• Pfam: Glycosyl hydrolases family 2, sugar binding domain (PF02837.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;