| Id Trinity | TRINITY_DN45049_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_411522 |
| Sequence | TGCAGTGGCCACGCTATCTCAACCTGAATATTCTCAAGTTCCAAGTTCAGTATGGGAGTTTTACCATTTCACTTCCTTCCACCTCCATGCAATGCTTCTA TATCTCCATCTCCAAGCTCTGTGGAAGGTGCAAATCTCAACTATGCCGTATCGGAGAGCTTGCATAACACTGTCTCCACAATAACAGGCAAAAAATTTCC AAGAAGGCTAATCCTACAGATTCTGGGTCTTAACCACGTGATATGTTATGCTTCTCCCGCTTTGGGTGCACCAATTATACCAAACATGAACGAACCTGAA GTCATACGGACTTTTAAGCTACCTAGTGGAGTGAGGATTCAAGACATTGTTGAAGGGGAAGGACCAGAAGCACACGGTGGAGATTTGGTTGAATTCAATT ATGTATGCAGGCGTGCAAATGGATATTTTGTTTACAGTACCGTGGATCAATTCAGTGGAGAAAGTAAACCTGTTGTACTTCCTTTGGATGAGAACCAGAT GATAGTGGGCTTAAAGGAGGTTCTGACTGGCATGAAACTTGGTGGTATGTTCCAAGATATTGTCATTATTTTCCTCACCAATCGTCATCGCCTCATGAAT TTTACGATTATTTTAGTCTAGACTTTTAGTGAAAATTGTCTGTTATTCTACATGACAATCTAGTTTGCATCTTTCCAATTTTTAACCATGAGAACTATCA TGTGTGTTAATGTAATTGTAGTCATGAGTCATTACTATTTTTTTGAAGAAATTATATTTTTTTGTACTATCAAAAGTATTCCCTCATATTTTGGGTAAAA AACTAATATGTTTCGAGAAGTGTCGTTCACAAGAATTGAGGCTTTGACCTTTTGGTCATATTAAGTATCTAGCGATTAACAGAGCCTTATAACACTGTAC CAAAAGCCTTATTAGTAGAAATTGTATCCTTTTGATATGACTATGGAAACTTTTACTCTCTTGTGGGTTTTCTCTTGTAGGAAAGAGAAGGGCACTAATA CCACCTTCAGCTGGATATGTAAATGAGAACTTGAAACCAATACCGGAAGAGTTTGGTCCTCGACGCAGCCTTTTTTCTCATGCACACGAGCCTTTGGTAT TTGAAGTTCAACTATTGAAAATTTGGGTCATGACTCTTGAACCACCTTCTGTATTTAAGTAGACTAGTTTTTGTTCTTGTGTCAGCCTGAATTTGTTTGT TCTTATGTCATGCTACAGAGTTTGATCCTTTGACAACCTTAATGGGATATAAAGAAATGCAAAGGAAATAAGGTGGGAGTTGTGTTTTAACAAGATGAAA AGAGGTTAGAGAAAGAAGCCTTATGCAGGTGGCATTATCTACGGAGAGAAAAACTTGGAAGAAGATACATGACACTTCATACATGAGCATTTATGCTTTT TATTGATTAAATTTTAATTAAAATTAAACTTTTAATGTTTTCACAATATTTAATTGGTTGTCTCTACATATATATGTTTCCATGTAAGTTTTTCTCAGTC GCTGATAAACTTGGATTAAGACACATATGGCACGTCACATTTAGAGACACGTGCATTTATGTTTTTTATTGCTATCATTTATGCAAATCTTTTTCATCCA GCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_138817; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_411522
| Blastp | Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic from Arabidopsis with 62.6% of identity |
|---|---|
| Blastx | Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic from Arabidopsis with 62.6% of identity |
| Eggnog | SFT2 domain containing(COG5102) |
| Kegg | Link to kegg annotations (AT4G26555) |
| CantataDB | Link to cantataDB annotations (CNT0002943) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447044.1) |
| Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase (PF00254.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |