Id Trinity | TRINITY_DN45076_c0_g1_i5 |
---|---|
Name Transcript | Ll_transcript_411839 |
Sequence | GTCCCTATCACTGAATCGTGTGTTGGGCTAGGTTGGGAACATGTCCCAGACCCAGCGAGGCTGAGTCTGACATCACCAAATCATTCGAATATACTCAAAA CGACTCTCTCACTCTCTGAATTCTCTCAGAAATTAACTCATTCTCTTCCAAATTTAGTTTCTTTTTTTAATTATCCTCTTTCTCGATGGGGAAAGGAGCA GGCTGTGTTCCCAGTAAAAAGAACACCCGAATTGTTACCGGCGGTTCTCCACGCGCCACCACTGGTACATCCAGGAACGCGCCGATCCCTCTCGATAACA GCCCCCACACTCACCAAACCTCCAACGCAATTCAAGAAACCGCGTCTTCCAATTCCGTCGCGGCGAAATTGAAGATCTTCATCGTGTTCTATTCCATGTA CGGACACGTGGAAGGCTTGGCTAAGAGGTTGAAGAAGGGAGTTGACGGCGTCGAAGGTGTGGAAGGGGTTTTGTATAGGGTTCCAGAAACTTTGCCAATT GAGGTCTTGGACCAGATGAAGGCGCCGCCCAAGGATGACGCCATACCGGAGATAACGGCGGCGAAGTTGGCGGAAGCCGACGGATTATTGTTCGGGTTCC CGACGAGGTATGGATCCATGGCGGCGCAAATGAAAGGGTTCTTTGATTCGACGGGGCAGTTGTGGAAGGAGCAGAAGCTTGCAGGGAAGCCCGCTGGGTT TTTCGTCAGTACTGGTACTCAAGGAGGAGGTCAAGAAACTACTGCGTAAGCATTTTCGATTTTTCTGTTTTATTTTGTTCTTATCTTCATTCTTGAACAG TATAGTGATATTGTAATTCAAGTAGGACTTGAACTGATCAAACATAAAAAGACTGATATTTTTAGCATAAGGACTTGAACTGAATACCTCACTTTTCATT TCTTCATGAGATGAATACTCATATTTTGATGTCTGAGACATTAATTGGATTGTGAAGTATAATGATCGAAATTGACAGTGTTTTGTGGAATTGGATGGTC ATTTGTCATGACTCAAGGGCTATATCTTAAATGCTTATTTTTGTTTCTATGTAACATGGATTTAGCATGGCTTGTATTTGTGCTGCGTAATTTTCCACTT GACAAGAGAGGAAGTGGGAATTGAGGAGACAGAGGGGGAGAGGGTTAGGAAAGAGGGTGAGCCTCGACAGTCGACACAATGTATAGCTGGTTATCTTGTG AGGTGGTCATGAGTTGAAATCCGAGAAATGATATTTTCGTTTAAGAGAATAAGTTTATGCATATCTATCTTCCCATAACTCACTAGGTGAGAGTCTTGTG CTGAATGCAAGAAGAGCATTGGCATTTAGAAGCCCTGTCCCAAATTCTTTGATATGCCAAATTATCTATGCTTTTCCGAAGCTTTAATTGATGAGTGAAT GATGCATAAGAAAATTCCAATGTATTCTCGAGTTATGTCTGTGAGCTGCATGTTATTATGGTTCATACTCACATCTTGATTACACAAAGTTCAGTTTAGG CATGTGCAAAACTACTTCAGGGGTAACTGCAGTGGGACAAATCAATTTTTTTAAGTTTTTCAAATGGCAAGAGGTGAAAGGTTTCACTCCTTTCTATCAT TTGTAGGTCGGTGTCTCGGTGAGCCGGCCTTTTATGTTGATTAGGTAACTAGAACGATGGTGCTGGTTTGCGTTGGATGAAGAGTTTTAGTTCCGCAATC ATCATCGTTTCAAATAACTTCAGTCTCCAGTATACAAAGAACTAATTTGAGATTGAATGGGTAATTCATAGTAGTGAATGTCTAAACCATAGCCTAAAAC CATTGTACATTCTTCTCCATGACAGAAATTAGACTAGTCTATTAGATAGAAATGCATAATCGAATGCTTAGCCGTGTGTTTTCGATTGCAGTTGGACGGC AATCACCCAGCTGGCACACCATGGAATGCTGTATGTTCCTGTTGGATATACATTTGGACCAGGAATGTTCAAGATGGATTCCATTAGAGGGGGTTCTCCA TATGGTGCAGGAGTATTTGCTGGTGATGGAACAAGAGAGCCAAGTGAAACAGAGTTGGCACTGGCAGAGCATCAGGGCAAGTATATGGCTCTTGTAGTTA AGAAGCTTGCGGCTTGAATTTTATGATTTCTTCATTTCATTCTATTGCTTATTGGTCATCTGTATTTTTTGACATTTTTGTTCTTGTCAAAATTGGTTCT GGCATTTCCCATGTTCTTGGCTCTGCATTTTTCTGGAAGGTGTATGCTTGTATGTAAAAGAAAGGAATAATATGAATTTGTTTATCTTCGTATCACCTTC TTTTTTTGGGTGTGTTTATATGTTTATTATGAATGAATTCGTATTATGACTTGGGACATGTATCAGATAAAAACCTTTTTTAACAATCTTGATTTTAAAT TACTTTTCGTAAA BLAST |
Tissue | pods |
Gene name | LI_gene_138865; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_411839
Blastp | Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 from Arabidopsis with 63.64% of identity |
---|---|
Blastx | Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 from Arabidopsis with 61.29% of identity |
Eggnog | Nadph-dependent fmn reductase(COG0655) |
Kegg | Link to kegg annotations (AT4G36750) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422117.1) |
Pfam | NADPH-dependent FMN reductase (PF03358.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |