Id Trinity | TRINITY_DN45091_c2_g1_i2 |
---|---|
Name Transcript | Ll_transcript_412130 |
Sequence | TTTTGTTTATCATGAGTCTTACACCATTACATTTAGTTCATTTTATAAGTGATTTGCCAAAATAGAATTAACATTTTGGTTAAATAGATCCCCAATAGAA GAGACACTATTGTTACAAAAGCCAATAATCTGTGGATCATTTACACAATTGCAAGGTTTCTAGGGTTTGAAATATAGAATTGGGCGCAATTTCAATAATG TATAGTTCAAGATTTCGTTTGGAACAAAGAAGGACCAAATTCAGATTCAGATTTTCTTCTCGAAAGCTTCTTCGTACCATCATTCTCTGTCTCGTCTTGT TTGCGATTTTGCCTCCCATTTTCTTTCACTTTCGCCTCTCACGCTTTCATCAGATTCAAGTGAGGAAGTGTGGTTGGCTTAATAATCCTCCTCTTGTATG TGCACATGGGGGTGATTCATCTAAGGCATCATCCAACACAATGGCTGCATATCTTTTTGCTCTACATTCTCAAGTGGACTGTATTGAGATTGATGTCTCT CGATCTTCAGATGGAGTTTTGTTTGCTCTCCATGATAGGCAGGGATTTGCAGAGGCTATCTGGAAACACAACTTCTAAAGTTGGTCACATGAGCTCAAAA GAGATAAGAGAGCTTGGTTCTACACGTCGTTCTGTTGAGAAGTTTAATGATGAAAGTATACCCACCATTCAAGATGCTCTATTGGTAATATTCTAGAATG CAGTAATATTTTCTTCCCCAAGTTATTTCTTCCAAATTTTTAGATCTATCATCCTACCCTTTCACCTCTTTGTAGTTTGCTTTTGCTATCTTTGACTATA TTCGGTTTCTATATTTGTTGACAACTTATCTTCTTTCATGTCATACTTCTCCTTTCTATAGTATATTTGACTACCTTCGAATTTGTTTATTTATTTTCAG TTGACTTCAAATTCAGTAAAACAGATAGTTTTGGATGTTAAAGTTGGACCCCCATTTTTTGAGAAAGGACTTGCCAAAGATATTCTCTCTATTGTACGTA TAATGCTTCTGTCCGACCCTTTCCCTCAGGCACTACATAAATGTTCATTTAGCTACAAGTGTCTCTTCTTGTTTTCTTTGCATATTAGCATGATTACTGC ATTAAAGCTTTAGTTTTCCCTTGAGTGGACAGCCTGCAAAAAGTATTTATGAGTGCCATCAAGAAGATTGCCGATAGTGAGCATATGGCCATTACTGTTA ATTTTTGGGCTCTTACTGAATGTTATCTTAAGTTCTAATATTTCTTTTCATACCTTTTGTCAATGTTAAATTTTTTAGAATTACTACATGGTTGTCTTAA AAATGTTAGTTTTCCATTAAGATGGTTTGAAATCTTTACATTCATCTCAATATCTACCCTCTCCTTGTTTTGGTCACCCATGTCCCCCTGTTTCATAGCT TAAAAACAATGCAGCATGCATTATAAAATGAGCAACACAGTGACCTGTACTTCCTACTTACTGAGCTTTTGGTAGCCCAAAATTGTCAGCTCCTCATAAA TTGTTCTAGCATAGCTTTATTATCTGCTAGATTCCTCTGTGGTCTTCAATTAGCTGGGTCTTCTAGCGATTGAGAGTAAATGGAGAAGGAAAGGATATAA TGAGGTGGTTGTGATAGTGTTGCCAGCTCAATGGTGCTCCTACAAGCTAGCAGGCATAGATTTATGATACATCAAAGCAAATATTAAAGATTAGTAATGT CTGTTTTCTAGATATTATATTTCCAAGACAATCTGGATTGGGTTAAACTTGGTTAAGCTAGTCTACAATCTTGATGTGTCCCAGTCATCTCAAGCTAAGT ATAATGTAGTAGTCCCAGCAGCAAGTGTATTTATGTTGTCTTGAAAAATATTATCACTTTATTTATGCTTTTGAGGTAATGTATTTGTTTTAAGCGTTCA ATGCAATCTGTCCTTCAGGTGGAGAAAACAGAGTGCAGAAACTGCCTCATATGGGCTAAAAGTGACAATTTAGCAAGGGAAGTGATTAAAATCTCATCAG ATATGAAGGTATGAACCAATTTAGTTAGATTAATTCTACTTACTTTTTCTTGTTTCAGTGTCTAGAAAGTCTTAACTCGTACCAGTAAAAATCTTCTGTT GTATTGTATTTGTTGTGGCTATTTTGGATCTAAAGTGGCAAAGGAAAATGAACGTGGATTACTATTTTTTTTATAAAATATTGATTGGCTGGGGAACATA AGAACAAAAAATTGTAACAGCTTTTTGGCCTGCAGTGTATTAACTTTCCCATTTCAACACAGCAAAAAGGTATTTGCTTATCAGCAAATAGACAAGTTAT CAAAATTGGTCTACTGGACCAACCTGGTTGGCTCACCATGAGTTGCCCATGGTGTGAGTTTGGCCAGGTTCACCCACTATAGTGGTGAGCCCAAATTGGC CATCCCAGCTCAACCCACCAGGGTTGTTGGGTTACATGGGTTGGCCTACCAATTTGTTTAAAGAAAGATTTACACGAACTCCACACTATTATATAAACTG ACTATGGTGTCTTGACATTTGTTATGCGTAATTATTTTTGTTGTATTTATTACTGACAAGATAAGTATTCTGTATCATAACAATGATACTACATGGAACT GCATTTTAGAAGTATTTTAAATATTACTTTCATCCTCCACTTCTATTTCTATGTATTTTAAGCCTGTGGTGATGCAGGTTGGGTACATTGTTATGAGGGA ACCTAAAACCGGCGCTAGAACAAATTTGTTGAGAATGAAAGGAGCTGAGGTTGTTGGTGTCTACCACCCATTGATAGATGAAAAGCTTATGAAAATTTTG CGCAGGAGGAACAAAAAGGTGTATGCTTGGACAGTTGATGATGAGGAATCCATGCAAAAGATGTTGTTTGAGAATGTTGATGCTATTGTTACTGGCAATC CAACTTTACTGCAGCAGCTAATGCAAAATACCAAAACACAATGTCTTGAAGAAGGTTATTCATTACCAAACTAATGTTTTGTTTCAATGAACATAACCAT TGTTTTAATGATGGCTTGTTCATGATGTGATACTTAAAGCACTAATCCTATGTGTAATCTCCATTCTTTTCTTTGTTACAGATTGACATTTAGCTGAAAT TTGCTAATAATTTCTTTTCATAAAAAAAGCACCATCTTGTTAATTTCTGC BLAST |
Tissue | pods |
Gene name | LI_gene_138904; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_412130
Blastp | Glycerophosphodiester phosphodiesterase GDPD4 from Arabidopsis with 64.58% of identity |
---|---|
Blastx | Glycerophosphodiester phosphodiesterase GDPD4 from Arabidopsis with 64.58% of identity |
Eggnog | glycerophosphoryl diester phosphodiesterase(COG0584) |
Kegg | Link to kegg annotations (AT1G71340) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434592.1) |
Pfam | Glycerophosphoryl diester phosphodiesterase family (PF03009.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |